Os01g0801500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Beta-1,3-glucanase precursor.
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Os01g0801500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Beta-1,3-glucanase precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.42 | 0.551 | 2.97 | -0.0993 | 0.121 | 8.97 | -0.0789 | -22.7 | 0.118 | 21.8 | 49.47 | 11 | -- | -- |
| 139.56 | 0.554 | 2.9 | 0.11 | 0.136 | 0.219 | -0.0801 | -- | 0.117 | 21.5 | 57.47 | 310 | -- | -- |
| 137.18 | 0.545 | 2.97 | -0.0762 | 0.124 | 9.57 | -- | -24.3 | 0.114 | 20.8 | 49.1 | 11 | -- | -- |
| 139.59 | 0.554 | 2.9 | 0.114 | 0.136 | 0.209 | -- | -- | 0.118 | 21.5 | 58.65 | 248 | -- | -- |
| 138 | 0.547 | 2.98 | -0.107 | -- | 10 | -- | -25.4 | 0.105 | -- | 49.16 | 11 | -- | -- |
| 139.85 | 0.554 | 2.9 | 0.117 | 0.131 | -- | -0.0786 | -- | 0.11 | 21 | -- | -- | -- | -- |
| 139.87 | 0.554 | 2.9 | 0.119 | 0.132 | -- | -- | -- | 0.11 | 21 | -- | -- | -- | -- |
| 140.45 | 0.552 | 2.89 | 0.106 | -- | 0.213 | -- | -- | 0.119 | -- | 58 | 248 | -- | -- |
| 139.92 | 0.554 | 2.9 | -- | 0.137 | 0.216 | -- | -- | 0.106 | 21.7 | 59.58 | 247 | -- | -- |
| 140.87 | 0.555 | 2.89 | 0.12 | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
| 140.24 | 0.554 | 2.9 | -- | 0.132 | -- | -- | -- | 0.0971 | 21 | -- | -- | -- | -- |
| 140.73 | 0.553 | 2.89 | -- | -- | 0.244 | -- | -- | 0.109 | -- | 57.61 | 248 | -- | -- |
| 141.24 | 0.555 | 2.9 | -- | -- | -- | -- | -- | 0.0963 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.42 | wind | 5.0 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 3 | 128.49 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 5 | 128.53 | wind | 5.0 | 10 | > th | dose independent | rect. | 21 | 1 |
| 15 | 129.33 | humidity | 80.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 23 | 129.61 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 30 | 129.61 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 62 | 131.43 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 77 | 133.13 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 102 | 134.44 | temperature | 20.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 141 | 134.96 | temperature | 20.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 143 | 134.96 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 16 | 3 |
| 174 | 135.14 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 193 | 135.21 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 194 | 135.21 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 211 | 135.33 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 12 |
| 217 | 135.40 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 17 | 6 |
| 294 | 136.01 | wind | 3.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 333 | 136.16 | wind | 3.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 368 | 136.36 | wind | 1.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 427 | 136.69 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 429 | 136.71 | wind | 5.0 | 270 | > th | dose dependent | rect. | 18 | 3 |
| 439 | 136.75 | wind | 5.0 | 10 | > th | dose independent | rect. | 21 | 7 |
| 463 | 136.81 | wind | 1.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 481 | 136.84 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 17 | 22 |
| 486 | 136.86 | wind | 5.0 | 270 | > th | dose independent | rect. | 18 | 4 |
| 496 | 136.88 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 501 | 136.89 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 528 | 136.96 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 2 |
| 688 | 137.24 | humidity | 50.0 | 10 | < th | dose independent | rect. | 17 | 19 |
| 695 | 137.25 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 17 |
| 701 | 137.25 | wind | 3.0 | 10 | > th | dose dependent | rect. | 16 | 12 |
| 743 | 137.34 | wind | 5.0 | 10 | > th | dose independent | rect. | 16 | 12 |
| 752 | 137.35 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 15 | 2 |
| 770 | 137.38 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 781 | 137.41 | wind | 1.0 | 90 | < th | dose independent | rect. | 5 | 1 |
| 789 | 137.42 | radiation | 40.0 | 720 | < th | dose independent | rect. | 15 | 16 |
| 794 | 137.43 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 16 | 2 |
| 830 | 137.46 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 21 |
| 836 | 137.48 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 837 | 137.48 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 8 |
| 838 | 137.48 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 16 |
| 844 | 137.49 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 16 |
| 847 | 137.49 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 853 | 137.51 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 7 |
| 859 | 137.51 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 15 | 9 |
| 874 | 137.54 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 8 |
| 878 | 137.54 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 8 |
| 880 | 137.55 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 8 |
| 888 | 137.56 | wind | 1.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 906 | 137.59 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 912 | 137.59 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 15 | 12 |
| 918 | 137.60 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 919 | 137.60 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 8 |
| 920 | 137.60 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 921 | 137.60 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 923 | 137.60 | radiation | 1.0 | 720 | < th | dose independent | rect. | 19 | 8 |
| 928 | 137.60 | wind | 3.0 | 10 | > th | dose independent | rect. | 11 | 12 |
| 929 | 137.60 | temperature | 10.0 | 720 | > th | dose independent | rect. | 3 | 16 |
| 932 | 137.60 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 944 | 137.61 | humidity | 50.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 950 | 137.62 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 3 |
| 952 | 137.62 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 995 | 137.67 | radiation | 40.0 | 90 | < th | dose independent | rect. | 11 | 12 |
| 998 | 137.67 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 16 | 1 |