Os01g0800500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Purple acid phosphatase, N-terminal domain containing protein.
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Os01g0800500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Purple acid phosphatase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 298.53 | 0.812 | 10.2 | -2.64 | 3.78 | 3.84 | 2.78 | 2.62 | -0.675 | 5.74 | 27.6 | 659 | 22.2 | -- |
| 307.83 | 0.817 | 10.2 | -2.32 | 3.78 | 3.64 | 2.96 | -- | -0.605 | 5.79 | 28.19 | 644 | 22.1 | -- |
| 314.29 | 0.826 | 10.2 | -2.61 | 3.74 | 4.07 | -- | 2.67 | -0.681 | 5.6 | 28.54 | 565 | 21.4 | -- |
| 324.25 | 0.839 | 10.2 | -2.27 | 3.8 | 4.04 | -- | -- | -0.601 | 5.45 | 29.42 | 584 | 21.4 | -- |
| 376.07 | 0.903 | 10.3 | -2.81 | -- | 5.25 | -- | 4.02 | -0.933 | -- | 46.34 | 160 | 24 | -- |
| 408.29 | 0.947 | 10.2 | -3.03 | 4.14 | -- | 3.26 | -- | -1.12 | 6.86 | -- | -- | -- | -- |
| 435.55 | 0.977 | 10.2 | -2.97 | 4.15 | -- | -- | -- | -1.13 | 6.86 | -- | -- | -- | -- |
| 397.44 | 0.929 | 10.3 | -2.73 | -- | 4.8 | -- | -- | -0.902 | -- | 58.32 | 507 | 3.33 | -- |
| 447.08 | 0.985 | 10.1 | -- | 3.94 | 5.12 | -- | -- | -0.155 | 5.28 | 28.2 | 684 | 21.6 | -- |
| 1337.13 | 1.71 | 10.3 | -2.89 | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
| 668.76 | 1.21 | 10.2 | -- | 4.11 | -- | -- | -- | -0.802 | 6.91 | -- | -- | -- | -- |
| 553.31 | 1.1 | 10.2 | -- | -- | 5.76 | -- | -- | -0.354 | -- | 38.44 | 520 | 3.39 | -- |
| 1556.72 | 1.84 | 10.3 | -- | -- | -- | -- | -- | -0.734 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 290.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 5 |
| 4 | 292.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 6 | 293.32 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 6 |
| 48 | 298.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 55 | 299.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 4 |
| 64 | 299.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 4 |
| 69 | 299.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 142 | 303.95 | temperature | 25 | 720 | < th | dose dependent | sin | 4 | NA |
| 324 | 310.79 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 336 | 311.08 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 9 |
| 350 | 311.44 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 395 | 312.72 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 401 | 312.98 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 6 |
| 412 | 313.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 4 |
| 458 | 314.78 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 5 |
| 471 | 314.97 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 7 |
| 606 | 318.41 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 2 |
| 615 | 318.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 655 | 319.60 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 12 |
| 843 | 322.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 846 | 322.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |