Os01g0799100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os01g0799100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 273.82 | 0.771 | 3.62 | 0.663 | 0.178 | 20 | 0.757 | -60.4 | -0.319 | 7.72 | 1 | 90 | 16 | 2 |
| 309.41 | 0.826 | 3.58 | 0.855 | 0.11 | -0.738 | 0.668 | -- | -0.34 | 8.19 | 1 | 70 | 15.9 | 4.97 |
| 275.44 | 0.773 | 3.62 | 0.681 | 0.177 | 20.3 | -- | -61.7 | -0.32 | 7.68 | 0.9977 | 88 | 16.1 | 2.1 |
| 294.99 | 0.8 | 3.58 | 0.808 | 0.159 | 3.72 | -- | -- | -0.329 | 8.91 | 1.321 | 83 | 16.6 | 2.17 |
| 277.12 | 0.775 | 3.63 | 0.685 | -- | 20 | -- | -61.2 | -0.318 | -- | 0.9993 | 86 | 16.2 | 1.99 |
| 309.94 | 0.825 | 3.58 | 0.843 | 0.116 | -- | 0.725 | -- | -0.339 | 8.03 | -- | -- | -- | -- |
| 311.49 | 0.826 | 3.58 | 0.864 | 0.115 | -- | -- | -- | -0.339 | 8.61 | -- | -- | -- | -- |
| 278.01 | 0.777 | 3.58 | 0.854 | -- | 4.88 | -- | -- | -0.317 | -- | 1.855 | 71 | 16.6 | 0.561 |
| 311.8 | 0.822 | 3.59 | -- | 0.201 | 4.02 | -- | -- | -0.413 | 7.4 | 1.4 | 84 | 16.5 | 2.25 |
| 312.23 | 0.826 | 3.59 | 0.864 | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
| 331.16 | 0.851 | 3.61 | -- | 0.119 | -- | -- | -- | -0.435 | 8.07 | -- | -- | -- | -- |
| 297.21 | 0.803 | 3.6 | -- | -- | 4.92 | -- | -- | -0.411 | -- | 1.821 | 73 | 16.6 | 0.629 |
| 331.94 | 0.85 | 3.61 | -- | -- | -- | -- | -- | -0.434 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 273.82 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 2 |
| 4 | 274.56 | wind | 1.0 | 90 | < th | dose dependent | rect. | 16 | 2 |
| 14 | 286.06 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 11 | 3 |
| 15 | 286.84 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 7 | 7 |
| 17 | 287.41 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 3 | 12 |
| 24 | 287.79 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 25 | 287.82 | humidity | 50.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 26 | 287.99 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 2 | 12 |
| 30 | 288.22 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 36 | 288.67 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 40 | 288.94 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 11 | 3 |
| 42 | 289.02 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 7 | 8 |
| 72 | 290.28 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 9 | 5 |
| 89 | 290.66 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 10 | 5 |
| 93 | 290.86 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 14 | 3 |
| 98 | 290.96 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 109 | 291.19 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 133 | 291.71 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 10 | 1 |
| 153 | 292.08 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 155 | 292.09 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 159 | 292.14 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 166 | 292.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 171 | 292.38 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 200 | 292.75 | atmosphere | 1000.0 | 90 | < th | dose independent | sin | 3 | NA |
| 230 | 293.20 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 232 | 293.25 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 234 | 293.27 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 279 | 293.37 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 283 | 293.39 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 287 | 293.43 | radiation | 40.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 312 | 293.47 | atmosphere | 1000.0 | 90 | > th | dose independent | sin | 3 | NA |
| 314 | 293.47 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 2 | 13 |
| 339 | 293.52 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 14 | 1 |
| 341 | 293.52 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 342 | 293.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 426 | 293.69 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 458 | 293.75 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 527 | 293.81 | radiation | 40.0 | 43200 | > th | dose independent | no | NA | NA |
| 677 | 293.84 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 678 | 293.84 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 840 | 294.05 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 20 | 16 |