Os01g0798800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
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Os01g0798800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF594 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.67 | 0.577 | 8.07 | 0.928 | 0.346 | -3.14 | 0.326 | -4.27 | 0.217 | 21.1 | 22.29 | 5017 | -- | -- |
| 160.06 | 0.589 | 8.19 | 0.868 | 0.238 | -1.8 | 0.277 | -- | 0.189 | 22 | 26.71 | 3620 | -- | -- |
| 151.03 | 0.572 | 8.08 | 0.927 | 0.347 | -3.12 | -- | -4.23 | 0.216 | 21 | 22.36 | 5013 | -- | -- |
| 159.24 | 0.588 | 8.2 | 0.77 | 0.324 | -1.74 | -- | -- | 0.155 | 20.3 | 26.18 | 3830 | -- | -- |
| 157.86 | 0.585 | 8.07 | 0.922 | -- | -3.17 | -- | -4.33 | 0.208 | -- | 22.39 | 5054 | -- | -- |
| 208.49 | 0.677 | 8.1 | 1.61 | 0.39 | -- | 0.427 | -- | 0.594 | 21.5 | -- | -- | -- | -- |
| 209.15 | 0.677 | 8.1 | 1.59 | 0.389 | -- | -- | -- | 0.594 | 21.4 | -- | -- | -- | -- |
| 164.56 | 0.597 | 8.19 | 0.765 | -- | -1.81 | -- | -- | 0.14 | -- | 26.33 | 3661 | -- | -- |
| 157.35 | 0.584 | 8.24 | -- | 0.295 | -1.81 | -- | -- | -0.0686 | 19.5 | 33.71 | 40757 | -- | -- |
| 218.03 | 0.69 | 8.09 | 1.59 | -- | -- | -- | -- | 0.593 | -- | -- | -- | -- | -- |
| 275.95 | 0.777 | 8.14 | -- | 0.392 | -- | -- | -- | 0.417 | 21.7 | -- | -- | -- | -- |
| 163.18 | 0.595 | 8.26 | -- | -- | -1.83 | -- | -- | -0.11 | -- | 53.68 | 39725 | -- | -- |
| 285.07 | 0.788 | 8.13 | -- | -- | -- | -- | -- | 0.416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.25 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 2 | 137.90 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 3 | 138.17 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 4 | 138.37 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 5 | 138.42 | humidity | 80 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 6 | 138.53 | humidity | 60 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 11 | 138.67 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 13 | 138.68 | humidity | 70 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 17 | 138.72 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 37 | 138.81 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 54 | 138.88 | humidity | 60 | 43200 | > th | dose dependent | sin | 13 | NA |
| 56 | 138.89 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 123 | 139.17 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 125 | 139.18 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 130 | 139.20 | humidity | 80 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 148 | 139.25 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 231 | 139.51 | wind | 3 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 290 | 139.72 | humidity | 90 | 43200 | < th | dose dependent | rect. | 17 | 10 |
| 332 | 139.86 | humidity | 80 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 349 | 139.91 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 357 | 139.92 | humidity | 60 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 390 | 140.01 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 408 | 140.07 | humidity | 90 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 417 | 140.10 | humidity | 90 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 478 | 140.26 | humidity | 90 | 43200 | < th | dose dependent | rect. | 15 | 16 |
| 488 | 140.29 | humidity | 90 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 505 | 140.33 | humidity | 90 | 43200 | < th | dose dependent | sin | 14 | NA |
| 568 | 140.51 | radiation | 10 | 43200 | < th | dose dependent | rect. | 17 | 12 |
| 570 | 140.52 | humidity | 60 | 43200 | > th | dose dependent | rect. | 24 | 7 |
| 626 | 140.66 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 630 | 140.67 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 657 | 140.72 | radiation | 10 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 672 | 140.74 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 719 | 140.84 | radiation | 40 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 722 | 140.84 | radiation | 40 | 43200 | < th | dose dependent | rect. | 17 | 6 |
| 778 | 140.93 | humidity | 60 | 43200 | > th | dose dependent | no | NA | NA |
| 791 | 140.94 | humidity | 60 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 801 | 140.97 | humidity | 70 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 866 | 141.09 | humidity | 60 | 43200 | > th | dose dependent | rect. | 23 | 23 |
| 870 | 141.10 | humidity | 60 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 896 | 141.18 | humidity | 70 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 995 | 141.37 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 14 |