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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0798200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.31 (0.0326) R2 : 0.605
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.23 (0.0844) R2dC : 0.609 R2C : 0.605
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00766 (0.0685) R2dN8 : 1.4e-05 R2N8 : -0.00366
σ : 0.614
deviance : 172.48
__
_____
C
peak time of C : 7.28
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
152.21 0.58 5.28 0.635 2.55 1.78 0.00435 -0.498 0.141 10.6 0.04992 328 -- --
152.8 0.576 5.28 0.617 2.56 1.79 0.395 -- 0.137 10.6 0.05 327 -- --
152.21 0.575 5.28 0.635 2.55 1.78 -- -0.499 0.141 10.6 0.05 327 -- --
153.44 0.577 5.28 0.621 2.55 1.78 -- -- 0.139 10.6 0.02 327 -- --
172.38 0.611 5.34 0.896 -- 3.11 -- 0.895 0.227 -- 0.02 880 -- --
167.39 0.607 5.3 0.429 2.23 -- 0.223 -- 0.0565 7.3 -- -- -- --
167.52 0.606 5.3 0.434 2.23 -- -- -- 0.056 7.29 -- -- -- --
172.3 0.611 5.33 0.749 -- 3.1 -- -- 0.183 -- 0.6586 880 -- --
163.05 0.595 5.3 -- 2.35 1.45 -- -- 0.0583 10.1 0.12 329 -- --
430.71 0.97 5.35 0.472 -- -- -- -- 0.0935 -- -- -- -- --
172.48 0.614 5.31 -- 2.23 -- -- -- 0.00766 7.28 -- -- -- --
184.8 0.633 5.35 -- -- 2.99 -- -- 0.112 -- 1.659 873 -- --
436.59 0.975 5.36 -- -- -- -- -- 0.0411 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 149.83 humidity 90.0 14400 > th dose independent rect. 7 1
2 150.36 precipitation 0.1 4320 > th dose dependent rect. 5 2
3 150.37 precipitation 0.1 4320 > th dose independent rect. 5 2
4 150.55 temperature 15.0 270 > th dose independent rect. 19 10
5 150.78 humidity 90.0 14400 < th dose independent rect. 7 1
6 150.97 humidity 90.0 14400 > th dose independent rect. 6 4
9 151.01 atmosphere 1000.0 30 > th dose independent rect. 17 17
10 151.09 humidity 50.0 270 > th dose dependent rect. 11 2
11 151.11 wind 9.0 14400 < th dose independent rect. 5 6
12 151.18 humidity 90.0 14400 < th dose independent rect. 6 4
14 151.24 temperature 20.0 30 > th dose dependent rect. 17 19
16 151.27 humidity 90.0 14400 > th dose dependent rect. 7 1
18 151.30 precipitation 0.1 4320 < th dose independent rect. 5 2
19 151.30 precipitation 0.1 4320 < th dose dependent rect. 5 2
54 151.98 precipitation 0.1 4320 < th dose independent rect. 5 4
56 151.98 precipitation 0.1 4320 < th dose dependent rect. 5 4
57 151.98 radiation 1.0 270 < th dose dependent rect. 19 19
62 152.03 humidity 80.0 14400 > th dose dependent rect. 9 1
66 152.07 humidity 90.0 14400 > th dose independent rect. 16 1
69 152.12 atmosphere 995.0 270 > th dose dependent rect. 10 4
72 152.17 precipitation 0.1 4320 < th dose independent rect. 5 6
74 152.17 precipitation 0.1 4320 < th dose dependent rect. 5 6
76 152.22 humidity 90.0 14400 > th dose independent rect. 6 11
86 152.28 wind 9.0 14400 < th dose independent rect. 23 12
102 152.39 temperature 15.0 270 > th dose independent rect. 5 14
108 152.41 atmosphere 995.0 10 > th dose dependent rect. 17 17
116 152.50 humidity 90.0 14400 > th dose independent rect. 5 15
123 152.54 humidity 50.0 270 > th dose dependent rect. 10 4
124 152.56 humidity 90.0 14400 > th dose independent rect. 3 17
129 152.57 humidity 90.0 14400 > th dose dependent rect. 3 18
132 152.58 humidity 80.0 1440 > th dose dependent rect. 7 2
140 152.61 atmosphere 995.0 270 > th dose dependent rect. 11 2
152 152.65 humidity 80.0 14400 > th dose dependent rect. 8 6
162 152.71 atmosphere 1015.0 270 < th dose dependent rect. 19 10
163 152.72 humidity 90.0 14400 > th dose independent sin 1 NA
174 152.76 humidity 90.0 90 < th dose independent rect. 16 18
182 152.79 humidity 80.0 1440 > th dose dependent rect. 5 8
183 152.79 humidity 90.0 14400 > th dose dependent rect. 6 14
186 152.80 radiation 1.0 270 > th dose independent rect. 15 19
197 152.85 humidity 80.0 14400 > th dose independent rect. 10 1
207 152.90 humidity 60.0 270 > th dose independent rect. 10 5
209 152.90 humidity 80.0 1440 > th dose dependent rect. 7 6
211 152.91 atmosphere 1000.0 90 > th dose independent rect. 11 5
214 152.92 humidity 90.0 14400 > th dose dependent sin 0 NA
228 152.98 humidity 80.0 1440 < th dose independent rect. 8 5
238 153.02 atmosphere 1005.0 43200 < th dose independent rect. 11 1
256 153.07 radiation 1.0 270 < th dose dependent rect. 19 22
273 153.16 humidity 60.0 270 > th dose independent rect. 11 2
278 153.18 humidity 80.0 1440 > th dose independent rect. 8 5
280 153.19 humidity 80.0 1440 < th dose independent rect. 21 17
286 153.21 atmosphere 1000.0 270 > th dose independent rect. 11 2
289 153.22 radiation 1.0 270 < th dose independent rect. 19 19
293 153.24 humidity 90.0 1440 > th dose independent rect. 7 1
301 153.27 humidity 80.0 14400 < th dose independent rect. 10 1
320 153.35 humidity 90.0 14400 > th dose dependent rect. 16 2
337 153.42 wind 1.0 10 > th dose independent rect. 12 17
339 153.43 humidity 90.0 14400 < th dose independent sin 1 NA
351 153.47 humidity 90.0 1440 < th dose independent rect. 7 1
352 153.47 wind 3.0 1440 < th dose independent rect. 11 2
368 153.54 wind 9.0 14400 > th dose independent rect. 5 6
371 153.56 humidity 90.0 14400 > th dose dependent rect. 19 1
373 153.57 humidity 90.0 14400 > th dose dependent rect. 16 4
375 153.58 radiation 1.0 270 > th dose independent rect. 14 21
383 153.61 atmosphere 1005.0 43200 > th dose independent rect. 3 1
397 153.65 humidity 80.0 14400 > th dose independent rect. 9 5
404 153.68 atmosphere 1005.0 43200 > th dose independent rect. 11 1
410 153.68 humidity 90.0 14400 < th dose independent rect. 3 17
431 153.74 humidity 80.0 1440 > th dose independent rect. 3 10
450 153.79 wind 3.0 1440 < th dose dependent rect. 8 5
453 153.80 precipitation 0.1 4320 > th dose independent rect. 2 15
463 153.82 wind 3.0 1440 < th dose independent rect. 8 5
493 153.86 humidity 90.0 14400 > th dose dependent rect. 13 8
519 153.91 precipitation 0.1 4320 < th dose independent rect. 2 15
523 153.91 precipitation 0.1 4320 < th dose dependent rect. 2 15
534 153.94 humidity 80.0 1440 < th dose independent rect. 3 10
536 153.95 atmosphere 1005.0 43200 < th dose independent rect. 1 1
545 153.96 atmosphere 1005.0 43200 < th dose independent rect. 3 1
554 153.98 humidity 80.0 1440 < th dose independent rect. 1 12
576 154.02 atmosphere 1005.0 43200 > th dose independent rect. 1 3
577 154.02 humidity 80.0 1440 < th dose independent rect. 5 8
583 154.03 wind 3.0 1440 > th dose independent rect. 11 2
585 154.03 humidity 80.0 1440 > th dose independent rect. 22 16
591 154.05 atmosphere 1000.0 30 > th dose independent rect. 10 7
614 154.09 atmosphere 1005.0 43200 < th dose independent rect. 1 3
634 154.13 wind 1.0 14400 > th dose independent rect. 18 1
669 154.19 wind 3.0 1440 > th dose independent rect. 8 5
671 154.20 humidity 80.0 1440 > th dose independent rect. 10 3
686 154.22 humidity 80.0 1440 < th dose independent rect. 11 2
692 154.23 humidity 90.0 14400 > th dose independent rect. 15 5
699 154.24 humidity 90.0 14400 > th dose independent rect. 19 1
709 154.26 radiation 1.0 270 < th dose independent rect. 19 11
713 154.27 atmosphere 1005.0 43200 < th dose independent rect. 22 6
725 154.29 wind 3.0 1440 < th dose dependent rect. 11 2
742 154.32 radiation 1.0 270 < th dose dependent rect. 19 11
743 154.33 humidity 80.0 1440 > th dose independent sin 5 NA
756 154.35 temperature 20.0 270 > th dose independent rect. 19 21
760 154.36 humidity 80.0 14400 > th dose independent rect. 13 1
769 154.38 humidity 80.0 1440 < th dose independent sin 5 NA
784 154.42 humidity 90.0 1440 < th dose independent rect. 5 4
789 154.43 precipitation 0.1 270 < th dose independent rect. 5 14
793 154.43 precipitation 0.1 270 < th dose dependent rect. 5 14
802 154.46 radiation 1.0 270 < th dose independent rect. 19 22
809 154.47 wind 3.0 14400 > th dose dependent rect. 5 1
829 154.51 humidity 90.0 14400 > th dose dependent rect. 7 21
848 154.54 wind 7.0 270 < th dose independent rect. 19 10
858 154.55 humidity 90.0 14400 > th dose independent rect. 13 8
864 154.55 wind 1.0 90 > th dose dependent rect. 16 18
868 154.56 humidity 50.0 90 > th dose dependent rect. 10 7
871 154.57 atmosphere 1005.0 43200 < th dose independent rect. 23 1
889 154.59 temperature 15.0 30 > th dose dependent rect. 5 7
895 154.60 precipitation 0.1 14400 < th dose independent rect. 18 1
896 154.60 humidity 90.0 1440 > th dose independent rect. 5 4
897 154.60 radiation 40.0 90 < th dose independent rect. 10 6
901 154.60 precipitation 0.1 14400 < th dose dependent rect. 18 1
913 154.62 precipitation 0.1 14400 > th dose independent rect. 18 1
938 154.65 temperature 20.0 10 > th dose dependent rect. 17 10
944 154.66 wind 3.0 90 > th dose independent rect. 16 19
960 154.68 wind 9.0 14400 > th dose independent rect. 23 12
966 154.69 humidity 90.0 14400 < th dose independent rect. 16 1
968 154.69 precipitation 0.1 270 < th dose independent rect. 13 22
972 154.69 precipitation 0.1 270 < th dose dependent rect. 13 22
976 154.70 radiation 1.0 270 < th dose dependent sin 11 NA
987 154.71 precipitation 0.1 4320 > th dose dependent rect. 2 15