Os01g0798100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0798100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.23 | 0.33 | 9.26 | -0.339 | 0.571 | -1.35 | -0.758 | -0.881 | 0.0996 | 8.8 | 28.05 | 1712 | -- | -- |
| 49.82 | 0.329 | 9.27 | -0.499 | 0.559 | -1.27 | -0.767 | -- | 0.0974 | 8.8 | 31.25 | 1670 | -- | -- |
| 50.57 | 0.331 | 9.25 | -0.366 | 0.663 | -1.24 | -- | -0.928 | 0.139 | 9.22 | 29.67 | 2223 | -- | -- |
| 51.35 | 0.334 | 9.26 | -0.569 | 0.664 | -1.22 | -- | -- | 0.113 | 9.33 | 42.98 | 2258 | -- | -- |
| 70.07 | 0.39 | 9.25 | -0.474 | -- | -1.29 | -- | -1.08 | 0.109 | -- | 39.8 | 7310 | -- | -- |
| 77.1 | 0.412 | 9.21 | -0.0945 | 0.536 | -- | -0.801 | -- | 0.357 | 8.9 | -- | -- | -- | -- |
| 79.27 | 0.417 | 9.21 | -0.121 | 0.538 | -- | -- | -- | 0.357 | 8.93 | -- | -- | -- | -- |
| 69.34 | 0.388 | 9.31 | -0.806 | -- | -1.28 | -- | -- | -0.0203 | -- | 45.41 | 8726 | -- | -- |
| 57.84 | 0.356 | 9.25 | -- | 0.614 | -1.43 | -- | -- | 0.201 | 6.27 | 42.98 | 2258 | -- | -- |
| 95.84 | 0.457 | 9.23 | -0.122 | -- | -- | -- | -- | 0.361 | -- | -- | -- | -- | -- |
| 79.66 | 0.418 | 9.21 | -- | 0.538 | -- | -- | -- | 0.371 | 8.95 | -- | -- | -- | -- |
| 75.29 | 0.404 | 9.26 | -- | -- | -1.03 | -- | -- | 0.22 | -- | 52.36 | 1505 | -- | -- |
| 96.24 | 0.458 | 9.22 | -- | -- | -- | -- | -- | 0.374 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.54 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 6 |
| 9 | 47.00 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 42 | 47.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 171 | 48.29 | temperature | 30 | 1440 | < th | dose dependent | sin | 5 | NA |
| 221 | 48.50 | temperature | 10 | 1440 | > th | dose dependent | sin | 6 | NA |
| 240 | 48.60 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 364 | 49.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 365 | 49.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 396 | 49.23 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 455 | 49.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 483 | 49.50 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 537 | 49.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 541 | 49.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 542 | 49.65 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 710 | 49.89 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 786 | 50.03 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 822 | 50.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 827 | 50.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 921 | 50.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 22 |