Os01g0797900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0797900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 221.97 | 0.7 | 4.39 | -0.17 | 2.17 | -1.8 | -0.494 | -6.88 | -0.595 | 6.63 | 21.32 | 5488 | -- | -- |
| 241.99 | 0.73 | 4.57 | -0.503 | 2.16 | 0.722 | -0.499 | -- | -0.65 | 6.74 | 21.32 | 5488 | -- | -- |
| 222.58 | 0.695 | 4.39 | -0.178 | 2.17 | -1.78 | -- | -6.83 | -0.594 | 6.61 | 21.35 | 5483 | -- | -- |
| 235.29 | 0.714 | 4.55 | -0.388 | 2.1 | 1.08 | -- | -- | -0.592 | 6.67 | 16.21 | 6419 | -- | -- |
| 468.07 | 1.01 | 4.43 | -0.0197 | -- | -1.74 | -- | -6.75 | -0.563 | -- | 22.58 | 5619 | -- | -- |
| 246.56 | 0.736 | 4.59 | -0.629 | 2.17 | -- | -0.4 | -- | -0.714 | 6.61 | -- | -- | -- | -- |
| 246.95 | 0.736 | 4.59 | -0.635 | 2.17 | -- | -- | -- | -0.713 | 6.59 | -- | -- | -- | -- |
| 475.16 | 1.02 | 4.6 | -0.382 | -- | 0.993 | -- | -- | -0.517 | -- | 32.33 | 12942 | -- | -- |
| 234.11 | 0.713 | 4.55 | -- | 2.17 | 1.77 | -- | -- | -0.564 | 6.56 | 16.5 | 6505 | -- | -- |
| 492.53 | 1.04 | 4.63 | -0.583 | -- | -- | -- | -- | -0.669 | -- | -- | -- | -- | -- |
| 257.58 | 0.751 | 4.57 | -- | 2.16 | -- | -- | -- | -0.642 | 6.61 | -- | -- | -- | -- |
| 478.34 | 1.02 | 4.6 | -- | -- | 1.77 | -- | -- | -0.531 | -- | 16.4 | 6420 | -- | -- |
| 501.48 | 1.05 | 4.62 | -- | -- | -- | -- | -- | -0.604 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 220.60 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 2 | 220.66 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 5 | 221.42 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 6 | 221.61 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 7 | 221.65 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 12 | 221.69 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 8 | 10 |
| 16 | 221.73 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 11 | 9 |
| 34 | 221.87 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 23 | NA |
| 36 | 221.88 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 11 | 9 |
| 55 | 221.96 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 58 | 221.98 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 60 | 221.99 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 6 |
| 63 | 222.00 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 171 | 222.26 | atmosphere | 1015 | 43200 | > th | dose dependent | no | NA | NA |
| 175 | 222.26 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 8 | 23 |
| 180 | 222.27 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 261 | 222.39 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 287 | 222.44 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 21 | NA |
| 316 | 222.51 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 398 | 222.67 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 408 | 222.70 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 21 | NA |
| 409 | 222.70 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 467 | 222.78 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 469 | 222.79 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 494 | 222.82 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 516 | 222.85 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 527 | 222.86 | temperature | 15 | 90 | > th | dose independent | rect. | 11 | 16 |
| 556 | 222.89 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 609 | 222.93 | temperature | 25 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 646 | 222.97 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 23 | 21 |
| 655 | 222.98 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 21 |
| 675 | 223.00 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 20 |
| 782 | 223.07 | atmosphere | 1015 | 43200 | > th | dose independent | no | NA | NA |
| 820 | 223.08 | temperature | 25 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 853 | 223.10 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 856 | 223.11 | atmosphere | 1015 | 43200 | < th | dose independent | no | NA | NA |
| 914 | 223.13 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 1 |