Os01g0795700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0795700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 273.3 | 0.777 | 4.28 | 1.19 | 1.94 | -1.63 | -0.218 | 1.02 | 0.853 | 1.99 | 25.87 | 1492 | -- | -- |
| 273.98 | 0.771 | 4.31 | 0.876 | 1.9 | -1.59 | -0.211 | -- | 0.778 | 1.97 | 25.8 | 1539 | -- | -- |
| 273.48 | 0.77 | 4.28 | 1.18 | 1.94 | -1.63 | -- | 0.985 | 0.852 | 1.98 | 25.88 | 1492 | -- | -- |
| 274.17 | 0.771 | 4.31 | 0.88 | 1.91 | -1.59 | -- | -- | 0.774 | 1.95 | 25.78 | 1539 | -- | -- |
| 391.42 | 0.926 | 4.33 | 0.635 | -- | -1.28 | -- | -0.295 | 0.655 | -- | 25.8 | 1712 | -- | -- |
| 349.39 | 0.876 | 4.43 | 0.332 | 1.88 | -- | -0.29 | -- | 0.251 | 2.05 | -- | -- | -- | -- |
| 349.71 | 0.876 | 4.43 | 0.341 | 1.88 | -- | -- | -- | 0.253 | 2.04 | -- | -- | -- | -- |
| 391.42 | 0.925 | 4.33 | 0.693 | -- | -1.28 | -- | -- | 0.662 | -- | 25.78 | 1539 | -- | -- |
| 293.31 | 0.798 | 4.32 | -- | 1.92 | -1.38 | -- | -- | 0.676 | 1.93 | 25.8 | 1558 | -- | -- |
| 562.74 | 1.11 | 4.41 | 0.419 | -- | -- | -- | -- | 0.297 | -- | -- | -- | -- | -- |
| 352.77 | 0.879 | 4.43 | -- | 1.89 | -- | -- | -- | 0.215 | 2.04 | -- | -- | -- | -- |
| 403.94 | 0.939 | 4.34 | -- | -- | -1.25 | -- | -- | 0.575 | -- | 25.78 | 1539 | -- | -- |
| 567.38 | 1.11 | 4.42 | -- | -- | -- | -- | -- | 0.251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.12 | temperature | 25 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 15 | 266.34 | temperature | 15 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 214 | 266.76 | temperature | 25 | 43200 | < th | dose dependent | sin | 13 | NA |
| 237 | 266.79 | temperature | 15 | 43200 | > th | dose dependent | sin | 13 | NA |
| 287 | 266.86 | temperature | 25 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 316 | 266.90 | temperature | 10 | 43200 | > th | dose dependent | rect. | 2 | 3 |
| 851 | 267.43 | temperature | 25 | 43200 | < th | dose dependent | no | NA | NA |
| 915 | 267.48 | temperature | 25 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 981 | 267.54 | temperature | 15 | 43200 | > th | dose dependent | no | NA | NA |