Os01g0795600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0795600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.97 | 0.425 | 10.2 | -2.15 | 0.809 | 0.481 | -0.622 | -0.251 | -0.00443 | 21.8 | 19.98 | 10 | -- | -- |
| 82.14 | 0.422 | 10.2 | -2.14 | 0.809 | 0.481 | -0.822 | -- | -0.00357 | 21.8 | 19.97 | 9 | -- | -- |
| 82.93 | 0.424 | 10.2 | -2.18 | 0.864 | 0.433 | -- | -0.519 | -0.0266 | 22 | 19.97 | 9 | -- | -- |
| 84.72 | 0.429 | 10.1 | -2.12 | 0.821 | 0.471 | -- | -- | 0.00651 | 21.9 | 19.97 | 9 | -- | -- |
| 102.86 | 0.472 | 10.1 | -2.13 | -- | 0.83 | -- | -0.537 | -0.0224 | -- | 8.85 | 15 | -- | -- |
| 90.73 | 0.447 | 10.2 | -2.14 | 1.14 | -- | -0.708 | -- | 0.00772 | 22.6 | -- | -- | -- | -- |
| 92.8 | 0.451 | 10.2 | -2.11 | 1.15 | -- | -- | -- | 0.00951 | 22.7 | -- | -- | -- | -- |
| 105.69 | 0.479 | 10.1 | -2.17 | -- | 0.827 | -- | -- | 0.0144 | -- | 8.78 | 15 | -- | -- |
| 201.35 | 0.661 | 10.1 | -- | 0.948 | 0.473 | -- | -- | 0.276 | 22 | 30.26 | 6 | -- | -- |
| 173.83 | 0.616 | 10.1 | -2.09 | -- | -- | -- | -- | 0.0155 | -- | -- | -- | -- | -- |
| 210.3 | 0.678 | 10.1 | -- | 1.13 | -- | -- | -- | 0.245 | 22.5 | -- | -- | -- | -- |
| 220.28 | 0.691 | 10.1 | -- | -- | 0.799 | -- | -- | 0.257 | -- | 10.21 | 16 | -- | -- |
| 289.01 | 0.794 | 10.1 | -- | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.81 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 2 | 77.04 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 4 | 77.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 7 | 77.94 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 18 | 78.70 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 21 | 78.98 | radiation | 20.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 26 | 79.09 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 14 |
| 30 | 79.10 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 15 | 18 |
| 33 | 79.15 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 34 | 79.16 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 13 |
| 40 | 79.19 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 10 |
| 59 | 79.31 | radiation | 30.0 | 30 | < th | dose independent | rect. | 12 | 22 |
| 72 | 79.49 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 17 | 16 |
| 83 | 79.65 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 16 |
| 101 | 79.77 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 136 | 80.05 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 144 | 80.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 148 | 80.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 10 |
| 151 | 80.16 | wind | 7.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 153 | 80.17 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 8 |
| 161 | 80.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 166 | 80.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 21 |
| 194 | 80.47 | radiation | 20.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 229 | 80.52 | radiation | 1.0 | 90 | < th | dose independent | sin | 11 | NA |
| 230 | 80.52 | radiation | 1.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 232 | 80.54 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 14 |
| 233 | 80.54 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 267 | 80.65 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 268 | 80.65 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 269 | 80.65 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 273 | 80.65 | radiation | 20.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 276 | 80.65 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 278 | 80.65 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 292 | 80.76 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 308 | 80.82 | radiation | 1.0 | 90 | > th | dose independent | sin | 11 | NA |
| 309 | 80.83 | radiation | 20.0 | 10 | < th | dose independent | sin | 22 | NA |
| 313 | 80.86 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 21 |
| 317 | 80.88 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 324 | 80.91 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 13 | 7 |
| 325 | 80.92 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 333 | 80.94 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 336 | 80.97 | radiation | 20.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 347 | 81.01 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 349 | 81.02 | radiation | 30.0 | 30 | < th | dose independent | rect. | 13 | 7 |
| 352 | 81.03 | temperature | 25.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 354 | 81.03 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 367 | 81.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 14 |
| 368 | 81.07 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 8 |
| 371 | 81.08 | radiation | 30.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 372 | 81.09 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 10 |
| 373 | 81.09 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 374 | 81.09 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 10 |
| 377 | 81.09 | radiation | 20.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 380 | 81.09 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 381 | 81.09 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 384 | 81.09 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 386 | 81.10 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 399 | 81.11 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 418 | 81.13 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 425 | 81.14 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 431 | 81.15 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 457 | 81.16 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 18 | 11 |
| 461 | 81.17 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 468 | 81.19 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 488 | 81.24 | humidity | 90.0 | 10 | < th | dose independent | rect. | 15 | 18 |
| 492 | 81.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 495 | 81.25 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 499 | 81.25 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 505 | 81.25 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 506 | 81.25 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 515 | 81.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 537 | 81.29 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 10 |
| 539 | 81.29 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 542 | 81.29 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 10 |
| 564 | 81.34 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 10 |
| 570 | 81.34 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 582 | 81.38 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 18 |
| 729 | 81.58 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 741 | 81.61 | radiation | 20.0 | 10 | > th | dose independent | sin | 23 | NA |
| 785 | 81.70 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 8 |
| 802 | 81.73 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 821 | 81.78 | radiation | 20.0 | 10 | < th | dose independent | rect. | 23 | 21 |
| 826 | 81.79 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 827 | 81.79 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 831 | 81.81 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 836 | 81.82 | humidity | 90.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 852 | 81.84 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 854 | 81.85 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 855 | 81.85 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 6 |
| 857 | 81.85 | radiation | 20.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 867 | 81.87 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 890 | 81.92 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 8 |
| 892 | 81.92 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 899 | 81.93 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 22 |
| 903 | 81.94 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 18 |
| 913 | 81.95 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 15 | 5 |
| 926 | 81.99 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 927 | 81.99 | radiation | 30.0 | 90 | < th | dose independent | rect. | 5 | 5 |
| 936 | 82.00 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 8 | 14 |
| 937 | 82.00 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 952 | 82.04 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 6 |
| 956 | 82.04 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 6 |
| 980 | 82.06 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 8 |
| 987 | 82.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 19 |