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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0795300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.79 (0.0292) R2 : 0.514
β1 : -2.33 (0.114) R2dD : 0.551 R2D : 0.321
β2 : 0.564 (0.0688) R2dC : 0.0721 R2C : 0.0577
β3 : 0.94 (0.11) R2dE : 0.103 R2E : -0.106
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.373 (0.0666) R2dN8 : 0.0532 R2N8 : -0.0581
σ : 0.533
deviance : 131.09
__
_____
C
peak time of C : 22.3
E
wheather : temperature
threshold : 20.83
memory length : 1562
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
130.47 0.537 4.81 -2.46 0.568 0.896 -0.0984 -0.605 -0.394 22.3 20.6 1605 -- --
131.14 0.533 4.8 -2.36 0.563 0.968 -0.0982 -- -0.389 22.1 20.71 1587 -- --
130.41 0.532 4.82 -2.45 0.565 0.883 -- -0.58 -0.403 22.3 20.81 1586 -- --
131.09 0.533 4.79 -2.33 0.564 0.94 -- -- -0.373 22.3 20.83 1562 -- --
146.64 0.564 4.82 -2.52 -- 0.912 -- -0.619 -0.438 -- 21.2 2198 -- --
151.97 0.578 4.74 -1.93 0.566 -- -0.0328 -- -0.142 22.3 -- -- -- --
151.98 0.577 4.74 -1.93 0.567 -- -- -- -0.142 22.3 -- -- -- --
147.39 0.565 4.79 -2.4 -- 1.01 -- -- -0.405 -- 20.83 2150 -- --
246.71 0.736 4.71 -- 0.614 0.276 -- -- 0.0218 22.4 20.83 1562 -- --
171.54 0.612 4.73 -1.92 -- -- -- -- -0.14 -- -- -- -- --
250.34 0.74 4.7 -- 0.557 -- -- -- 0.0732 22.1 -- -- -- --
220.44 0.692 4.59 -- -- -1.01 -- -- 0.471 -- 26.19 47520 -- --
269.09 0.766 4.68 -- -- -- -- -- 0.073 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 128.63 wind 3 43200 > th dose independent rect. 1 1
2 128.74 wind 3 43200 < th dose independent rect. 1 1
3 129.00 wind 9 14400 > th dose independent rect. 21 16
4 129.10 wind 9 14400 < th dose independent rect. 21 15
11 129.49 wind 9 14400 > th dose dependent rect. 21 16
15 129.93 wind 5 43200 < th dose dependent rect. 1 1
19 130.21 wind 1 43200 > th dose dependent rect. 1 1
20 130.35 wind 9 14400 < th dose independent sin 7 NA
21 130.42 humidity 80 14400 > th dose dependent rect. 12 1
22 130.43 wind 3 43200 > th dose independent rect. 23 4
23 130.43 wind 3 43200 < th dose dependent rect. 23 3
24 130.44 humidity 50 43200 > th dose independent rect. 17 1
25 130.44 humidity 50 43200 < th dose independent rect. 17 1
26 130.44 wind 9 14400 < th dose independent rect. 5 7
27 130.49 wind 7 14400 > th dose dependent rect. 2 11
32 130.56 temperature 20 4320 < th dose independent rect. 19 2
37 130.61 humidity 50 43200 < th dose independent rect. 16 6
44 130.63 humidity 50 43200 > th dose independent rect. 16 6
45 130.63 humidity 50 43200 > th dose independent rect. 16 8
57 130.72 temperature 20 4320 < th dose dependent rect. 21 5
62 130.79 wind 9 14400 > th dose independent sin 7 NA
64 130.81 wind 3 43200 < th dose independent rect. 23 4
70 130.88 temperature 20 1440 > th dose independent rect. 10 21
75 130.89 wind 7 14400 > th dose dependent rect. 5 7
80 130.91 humidity 60 43200 < th dose dependent rect. 17 2
82 130.91 temperature 20 4320 < th dose dependent rect. 18 10
83 130.92 radiation 30 4320 < th dose independent rect. 21 11
86 130.92 temperature 20 4320 < th dose dependent rect. 22 2
89 130.92 temperature 20 4320 < th dose dependent rect. 20 8
92 130.93 radiation 30 4320 < th dose independent rect. 24 8
102 130.95 radiation 30 4320 < th dose independent rect. 2 6
116 130.99 temperature 20 90 > th dose independent rect. 17 22
117 130.99 temperature 20 1440 < th dose independent rect. 9 22
122 131.00 radiation 30 4320 < th dose independent rect. 4 4
125 131.00 wind 1 43200 < th dose dependent rect. 10 1
148 131.05 humidity 80 14400 > th dose dependent rect. 10 3
150 131.06 wind 3 43200 < th dose independent rect. 23 1
153 131.07 temperature 20 4320 < th dose dependent sin 13 NA
155 131.07 humidity 90 14400 > th dose dependent rect. 8 1
166 131.09 temperature 25 1440 < th dose dependent rect. 14 10
178 131.12 radiation 30 4320 < th dose independent rect. 6 2
180 131.12 temperature 20 1440 > th dose independent rect. 12 16
191 131.14 wind 1 43200 > th dose dependent rect. 22 4
217 131.20 wind 1 43200 > th dose dependent rect. 23 1
223 131.22 wind 9 43200 < th dose dependent rect. 23 1
257 131.31 temperature 20 1440 > th dose independent rect. 15 13
265 131.32 temperature 20 1440 < th dose independent rect. 12 16
267 131.32 temperature 25 1440 < th dose dependent rect. 19 1
277 131.34 temperature 20 4320 < th dose independent rect. 17 6
289 131.36 wind 9 14400 > th dose independent rect. 6 5
296 131.37 wind 9 14400 > th dose independent rect. 5 7
302 131.38 wind 3 43200 > th dose independent rect. 23 1
329 131.41 wind 9 14400 > th dose dependent sin 7 NA
346 131.43 temperature 25 1440 < th dose dependent rect. 18 3
385 131.49 temperature 20 4320 > th dose independent rect. 19 2
388 131.49 temperature 20 4320 < th dose dependent rect. 1 1
396 131.50 temperature 20 1440 > th dose independent sin 15 NA
398 131.50 temperature 20 1440 < th dose independent rect. 15 13
403 131.51 humidity 80 14400 > th dose independent rect. 10 1
418 131.54 wind 1 43200 > th dose independent rect. 10 3
481 131.61 wind 3 43200 < th dose dependent rect. 21 10
506 131.64 wind 7 14400 > th dose dependent rect. 9 3
525 131.67 temperature 20 1440 < th dose independent sin 15 NA
526 131.67 humidity 80 14400 < th dose independent rect. 10 1
527 131.67 humidity 90 14400 > th dose independent rect. 8 2
542 131.69 temperature 20 1440 > th dose independent rect. 22 22
564 131.72 temperature 20 4320 > th dose independent rect. 18 4
595 131.76 humidity 80 14400 > th dose independent rect. 10 3
596 131.76 temperature 20 4320 > th dose independent rect. 16 7
597 131.76 temperature 20 4320 > th dose independent rect. 15 9
614 131.77 temperature 20 1440 < th dose independent rect. 22 22
623 131.78 temperature 20 1440 > th dose independent rect. 16 22
631 131.79 wind 9 14400 < th dose independent rect. 2 10
640 131.80 temperature 20 1440 > th dose independent rect. 1 23
641 131.80 temperature 20 30 > th dose independent rect. 8 23
654 131.81 temperature 20 1440 > th dose independent no NA NA
706 131.85 temperature 20 1440 > th dose independent rect. 5 23
729 131.87 temperature 20 1440 < th dose independent rect. 16 22
732 131.87 temperature 20 4320 < th dose dependent no NA NA
736 131.87 temperature 20 4320 < th dose dependent rect. 20 23
743 131.88 temperature 20 4320 < th dose dependent rect. 3 1
749 131.89 humidity 90 14400 < th dose independent rect. 8 1
785 131.92 temperature 20 1440 < th dose independent no NA NA
794 131.93 humidity 80 14400 > th dose independent rect. 12 1
796 131.93 humidity 90 14400 < th dose independent rect. 8 3
802 131.93 temperature 20 1440 < th dose independent rect. 1 23
810 131.94 wind 1 43200 < th dose independent rect. 10 3
818 131.94 temperature 20 4320 < th dose dependent rect. 1 23
819 131.94 temperature 20 4320 < th dose dependent rect. 3 23
820 131.95 wind 3 43200 < th dose independent rect. 6 1
862 131.97 temperature 20 4320 < th dose dependent rect. 5 23
875 131.98 temperature 20 1440 < th dose independent rect. 5 23
922 132.03 wind 3 43200 > th dose independent rect. 6 1
929 132.03 wind 3 43200 < th dose independent rect. 19 12
950 132.04 humidity 80 43200 < th dose dependent rect. 18 13
954 132.05 humidity 90 14400 < th dose independent rect. 8 5
955 132.05 wind 3 43200 > th dose independent rect. 19 12
966 132.06 wind 9 14400 > th dose independent rect. 19 19
978 132.06 temperature 25 720 < th dose dependent rect. 4 20