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Os01g0795200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Subtilase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.68 (0.0754) R2 : 0.621
β1 : 6.56 (0.39) R2dD : 0.644 R2D : -0.061
β2 : 1.14 (0.157) R2dC : 0.0465 R2C : -0.0766
β3 : -3.87 (0.228) R2dE : 0.281 R2E : -0.127
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 4.84 (1.16) R2dD*E : 0.035 R2D*E : -0.279
γ1 : 2.71 (0.161) R2dN8 : 0.417 R2N8 : 0.034
σ : 1.23
deviance : 695.75
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C
peak time of C : 22.8
E
wheather : temperature
threshold : 19.59
memory length : 1439
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 16.8
open length of G : 0.217

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
693.4 1.24 6.67 6.53 1.17 -3.78 -0.96 4.86 2.71 22.8 19.9 1438 16.8 0.284
749.75 1.28 6.7 6.44 1.13 -4.03 0.0574 -- 2.73 23.5 18.86 1441 16.9 0.268
695.75 1.23 6.68 6.56 1.14 -3.87 -- 4.84 2.71 22.8 19.59 1439 16.8 0.217
721.03 1.25 6.7 5.47 1.2 -3.75 -- -- 2.55 22.2 18.95 1440 16.9 0.161
779.7 1.3 6.67 6.62 -- -3.76 -- 4.94 2.7 -- 19.57 1439 16.9 0.183
1121.63 1.57 6.92 4.11 1.09 -- -0.91 -- 1.96 22.3 -- -- -- --
1124.74 1.57 6.92 4.15 1.1 -- -- -- 1.96 22.1 -- -- -- --
801.72 1.32 6.71 5.45 -- -3.76 -- -- 2.52 -- 18.82 1439 17 0.0833
1427.64 1.76 6.68 -- 1.12 -2.19 -- -- 2.41 22.9 20.1 1435 17.8 0.526
1198.35 1.62 6.89 4.17 -- -- -- -- 1.96 -- -- -- -- --
1579.34 1.86 7.03 -- 1.12 -- -- -- 1.5 22.4 -- -- -- --
1499.39 1.8 6.7 -- -- -2.26 -- -- 2.39 -- 20 1445 18.1 0.0167
1656.54 1.9 7 -- -- -- -- -- 1.5 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 692.70 wind 9 43200 > th dose dependent rect. 18 12
3 700.23 wind 9 43200 > th dose independent rect. 18 12
5 701.37 temperature 20 1440 > th dose dependent rect. 17 1
7 706.32 wind 9 43200 < th dose independent rect. 18 12
11 708.56 wind 7 43200 > th dose dependent rect. 18 3
23 711.35 temperature 20 1440 > th dose dependent rect. 13 6
31 712.89 temperature 20 1440 > th dose dependent rect. 11 8
45 715.31 wind 9 43200 > th dose independent rect. 18 6
56 716.04 wind 9 43200 > th dose dependent rect. 18 6
72 717.51 temperature 20 1440 > th dose dependent sin 19 NA
92 719.14 temperature 30 1440 < th dose dependent rect. 17 1
102 720.31 wind 9 43200 < th dose independent rect. 18 6
242 727.73 wind 7 43200 > th dose independent rect. 18 3
268 728.73 wind 7 43200 < th dose independent rect. 18 3
318 730.42 wind 7 43200 > th dose independent rect. 20 1
416 733.33 wind 5 43200 < th dose independent rect. 13 20
418 733.37 wind 5 43200 > th dose independent rect. 13 20
464 734.60 wind 5 43200 > th dose dependent rect. 14 19
503 735.46 wind 5 43200 < th dose independent rect. 15 17
507 735.58 temperature 20 1440 > th dose dependent rect. 13 1
531 736.35 temperature 20 1440 > th dose dependent no NA NA
558 737.45 temperature 20 1440 > th dose dependent rect. 13 23
646 739.75 temperature 20 270 > th dose dependent rect. 13 23
652 739.89 temperature 20 1440 > th dose dependent rect. 15 23
658 739.99 temperature 20 1440 > th dose dependent rect. 17 23
697 741.09 wind 9 43200 > th dose independent sin 12 NA
740 742.14 temperature 30 1440 < th dose dependent rect. 11 11
748 742.30 wind 5 43200 < th dose independent rect. 23 22
782 742.98 wind 5 43200 > th dose independent rect. 23 22
797 743.25 wind 7 43200 > th dose dependent sin 12 NA
846 744.23 wind 5 43200 < th dose independent sin 14 NA
854 744.33 wind 5 43200 > th dose independent sin 14 NA
863 744.45 wind 9 43200 < th dose independent sin 12 NA
887 744.85 temperature 30 1440 < th dose dependent sin 19 NA
917 745.28 wind 5 43200 < th dose independent rect. 3 23
930 745.44 wind 5 43200 < th dose independent rect. 6 23
961 745.73 wind 5 43200 < th dose independent no NA NA