Os01g0795000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Subtilase.
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Os01g0795000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Subtilase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 239.71 | 0.727 | 5.48 | -0.161 | 2.01 | 25.5 | 0.022 | 47.7 | 0.541 | 1.84 | 15 | 1690 | -- | -- |
| 251.46 | 0.744 | 5.78 | 0.762 | 2.02 | 2.72 | -0.092 | -- | 0.609 | 1.86 | 14.5 | 1886 | -- | -- |
| 239.71 | 0.721 | 5.48 | -0.159 | 2.01 | 25.5 | -- | 47.7 | 0.541 | 1.84 | 15 | 1681 | -- | -- |
| 239.98 | 0.722 | 5.79 | 0.497 | 2.01 | 3.11 | -- | -- | 0.554 | 1.77 | 14.85 | 1713 | -- | -- |
| 477.09 | 1.02 | 5.44 | -0.0476 | -- | 25.5 | -- | 48.5 | 0.6 | -- | 15.02 | 1032 | -- | -- |
| 265.36 | 0.764 | 5.77 | 0.876 | 1.98 | -- | 0.223 | -- | 0.638 | 1.89 | -- | -- | -- | -- |
| 265.55 | 0.763 | 5.77 | 0.869 | 1.98 | -- | -- | -- | 0.637 | 1.9 | -- | -- | -- | -- |
| 472.46 | 1.01 | 5.8 | 0.316 | -- | 3.11 | -- | -- | 0.506 | -- | 15.4 | 2393 | -- | -- |
| 246.06 | 0.731 | 5.8 | -- | 2.01 | 3.49 | -- | -- | 0.482 | 1.83 | 14.9 | 1713 | -- | -- |
| 502.96 | 1.05 | 5.75 | 0.951 | -- | -- | -- | -- | 0.682 | -- | -- | -- | -- | -- |
| 285.45 | 0.79 | 5.79 | -- | 2 | -- | -- | -- | 0.54 | 1.91 | -- | -- | -- | -- |
| 473.54 | 1.01 | 5.79 | -- | -- | 2.67 | -- | -- | 0.477 | -- | 15.6 | 2446 | -- | -- |
| 526.8 | 1.07 | 5.77 | -- | -- | -- | -- | -- | 0.577 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 226.63 | wind | 7 | 14400 | < th | dose independent | rect. | 20 | 8 |
| 2 | 226.64 | wind | 7 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 4 | 226.77 | wind | 5 | 14400 | > th | dose dependent | rect. | 20 | 8 |
| 9 | 227.50 | wind | 7 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 10 | 227.53 | wind | 7 | 14400 | > th | dose independent | sin | 11 | NA |
| 11 | 227.53 | wind | 7 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 15 | 227.65 | wind | 7 | 14400 | < th | dose independent | sin | 11 | NA |
| 20 | 227.84 | wind | 7 | 14400 | > th | dose dependent | sin | 11 | NA |
| 25 | 227.95 | wind | 7 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 28 | 228.01 | wind | 9 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 31 | 228.06 | wind | 7 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 37 | 228.14 | wind | 7 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 47 | 228.24 | wind | 7 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 80 | 228.63 | wind | 5 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 205 | 230.26 | wind | 7 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 226 | 230.51 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 236 | 230.60 | wind | 7 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 302 | 231.54 | wind | 7 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 312 | 231.66 | wind | 7 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 319 | 231.75 | wind | 7 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 320 | 231.75 | wind | 9 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 329 | 231.88 | temperature | 20 | 720 | < th | dose dependent | rect. | 9 | 13 |
| 376 | 232.37 | wind | 7 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 380 | 232.40 | wind | 7 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 397 | 232.58 | wind | 7 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 499 | 233.34 | wind | 7 | 1440 | > th | dose dependent | rect. | 4 | 6 |
| 521 | 233.44 | wind | 7 | 1440 | > th | dose dependent | rect. | 1 | 9 |
| 523 | 233.45 | wind | 7 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 610 | 234.04 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 13 |
| 864 | 235.11 | humidity | 70 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 880 | 235.16 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 915 | 235.30 | temperature | 20 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 965 | 235.50 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 13 |