Os01g0794900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0794900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.42 | 0.524 | 6.86 | 0.316 | 1.47 | 2.04 | -0.14 | 2.19 | 0.451 | 1.33 | 28.82 | 75 | -- | -- |
| 129.96 | 0.531 | 6.83 | 0.666 | 1.52 | 2.02 | 0.353 | -- | 0.49 | 1.41 | 29 | 81 | -- | -- |
| 124.48 | 0.52 | 6.86 | 0.341 | 1.47 | 2.04 | -- | 2.07 | 0.457 | 1.33 | 28.8 | 75 | -- | -- |
| 130.47 | 0.532 | 6.82 | 0.685 | 1.49 | 2 | -- | -- | 0.54 | 1.34 | 29.1 | 74 | -- | -- |
| 210.74 | 0.68 | 6.78 | 0.646 | -- | 3.37 | -- | 2.28 | 0.72 | -- | 29.4 | 43 | -- | -- |
| 182.64 | 0.634 | 6.91 | 0.211 | 2.11 | -- | 0.721 | -- | 0.134 | 1.75 | -- | -- | -- | -- |
| 184.68 | 0.636 | 6.91 | 0.188 | 2.11 | -- | -- | -- | 0.13 | 1.77 | -- | -- | -- | -- |
| 217.02 | 0.689 | 6.74 | 1.03 | -- | 3.4 | -- | -- | 0.813 | -- | 29.83 | 8 | -- | -- |
| 141.51 | 0.554 | 6.84 | -- | 1.59 | 1.72 | -- | -- | 0.41 | 1.43 | 29.16 | 70 | -- | -- |
| 454.32 | 0.996 | 6.88 | 0.274 | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
| 185.62 | 0.637 | 6.91 | -- | 2.11 | -- | -- | -- | 0.109 | 1.77 | -- | -- | -- | -- |
| 243.14 | 0.729 | 6.78 | -- | -- | 3.13 | -- | -- | 0.652 | -- | 29.9 | 7 | -- | -- |
| 456.31 | 0.997 | 6.89 | -- | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.78 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 2 | 122.39 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 4 | 122.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 8 | 124.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 10 | 124.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 12 | 125.39 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 14 | 125.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 16 | 125.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 17 | 125.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 22 | 126.36 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 25 | 126.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 30 | 126.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 31 | 126.68 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 33 | 126.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 35 | 126.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 41 | 127.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 42 | 127.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 79 | 128.80 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 22 |
| 188 | 131.71 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 22 |
| 193 | 131.85 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 207 | 131.98 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 229 | 132.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 241 | 132.56 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 243 | 132.59 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 20 |
| 268 | 132.88 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 23 |
| 306 | 133.55 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 23 |
| 389 | 134.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 391 | 134.85 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 413 | 135.31 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 423 | 135.44 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 427 | 135.51 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 23 |
| 438 | 135.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 446 | 135.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 463 | 136.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 465 | 136.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 466 | 136.12 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 18 |
| 480 | 136.39 | temperature | 25 | 270 | > th | dose independent | rect. | 11 | 23 |
| 500 | 136.67 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 23 |
| 685 | 138.57 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 744 | 139.06 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 16 |
| 785 | 139.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 925 | 140.36 | temperature | 20 | 90 | > th | dose dependent | sin | 8 | NA |
| 973 | 140.72 | temperature | 25 | 10 | < th | dose dependent | sin | 21 | NA |