Os01g0794800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Subtilase.
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Os01g0794800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Subtilase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.86 | 0.495 | 7.24 | 2.17 | 1 | -2.35 | -0.231 | 1.88 | 0.181 | 0.335 | 19.72 | 3656 | -- | -- |
| 112.5 | 0.494 | 7.31 | 1.73 | 1.02 | -2.4 | -0.23 | -- | 0.0358 | 0.4 | 18.38 | 3722 | -- | -- |
| 107.86 | 0.484 | 7.23 | 2.06 | 1.09 | -2.4 | -- | 1.72 | 0.209 | 0.211 | 19.22 | 2339 | -- | -- |
| 109.72 | 0.488 | 7.31 | 1.61 | 1.08 | -2.42 | -- | -- | 0.0796 | 0.144 | 18.26 | 2305 | -- | -- |
| 137.21 | 0.549 | 7.28 | 1.42 | -- | -2.75 | -- | 1.1 | 0.0342 | -- | 17.63 | 5982 | -- | -- |
| 244 | 0.732 | 7.42 | 0.664 | 0.784 | -- | -0.249 | -- | -0.447 | 0.484 | -- | -- | -- | -- |
| 244.26 | 0.732 | 7.41 | 0.674 | 0.785 | -- | -- | -- | -0.446 | 0.541 | -- | -- | -- | -- |
| 138.07 | 0.55 | 7.3 | 1.27 | -- | -2.95 | -- | -- | -0.0121 | -- | 15.92 | 5995 | -- | -- |
| 162.48 | 0.594 | 7.37 | -- | 1 | -1.75 | -- | -- | -0.215 | 24 | 20.83 | 2144 | -- | -- |
| 282.93 | 0.786 | 7.4 | 0.701 | -- | -- | -- | -- | -0.433 | -- | -- | -- | -- | -- |
| 256.23 | 0.749 | 7.43 | -- | 0.795 | -- | -- | -- | -0.521 | 0.583 | -- | -- | -- | -- |
| 178.06 | 0.624 | 7.35 | -- | -- | -2.59 | -- | -- | -0.197 | -- | 15.92 | 5995 | -- | -- |
| 295.89 | 0.803 | 7.42 | -- | -- | -- | -- | -- | -0.511 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.39 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 2 | 105.44 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 6 | 105.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 8 | 106.12 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 10 | 106.14 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 13 | 106.21 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 10 |
| 15 | 106.24 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 32 | 106.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 87 | 106.97 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 222 | 108.22 | temperature | 10 | 4320 | > th | dose dependent | sin | 13 | NA |
| 277 | 108.59 | temperature | 30 | 4320 | < th | dose dependent | sin | 13 | NA |
| 323 | 108.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 9 |