Os01g0793900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0793900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 244.71 | 0.735 | 9.09 | 0.0335 | 2.08 | -0.456 | -1.11 | -5.23 | -0.0129 | 13.2 | 24.79 | 2569 | -- | -- |
| 264.48 | 0.757 | 8.98 | 1.39 | 2.13 | -0.793 | -0.665 | -- | 0.0568 | 13.2 | 30.8 | 4327 | -- | -- |
| 248.87 | 0.735 | 9.09 | 0.111 | 2.1 | -0.487 | -- | -5.09 | 0.0054 | 13.2 | 24.9 | 2701 | -- | -- |
| 264.11 | 0.757 | 8.97 | 1.48 | 2.15 | -0.657 | -- | -- | 0.2 | 13.2 | 29.6 | 5747 | -- | -- |
| 504.45 | 1.05 | 9.09 | 0.34 | -- | -1.03 | -- | -4.3 | -0.0145 | -- | 24.71 | 2511 | -- | -- |
| 284.42 | 0.791 | 8.96 | 1.29 | 2.19 | -- | -0.56 | -- | 0.226 | 13.2 | -- | -- | -- | -- |
| 285.71 | 0.792 | 8.96 | 1.27 | 2.19 | -- | -- | -- | 0.223 | 13.2 | -- | -- | -- | -- |
| 493.15 | 1.03 | 9 | 1.09 | -- | -1.5 | -- | -- | 0.414 | -- | 25.5 | 1063 | -- | -- |
| 320.03 | 0.833 | 8.99 | -- | 2.14 | -0.469 | -- | -- | 0.0591 | 13.1 | 30.3 | 4343 | -- | -- |
| 582.4 | 1.13 | 8.99 | 1.19 | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
| 328.49 | 0.848 | 8.99 | -- | 2.17 | -- | -- | -- | 0.0814 | 13.2 | -- | -- | -- | -- |
| 546.54 | 1.09 | 8.93 | -- | -- | -1.41 | -- | -- | 0.512 | -- | 25.5 | 1002 | -- | -- |
| 619.71 | 1.16 | 9.02 | -- | -- | -- | -- | -- | 0.0467 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 236.54 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 2 | 236.79 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 20 | 22 |
| 3 | 237.06 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 4 | 237.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 7 | 237.89 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 20 |
| 17 | 240.20 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 28 | 241.90 | humidity | 70 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 29 | 242.06 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 15 |
| 34 | 242.24 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 14 |
| 37 | 242.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 38 | 242.51 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 42 | 242.72 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 14 |
| 44 | 242.77 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 47 | 242.85 | wind | 1 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 60 | 243.03 | radiation | 1 | 30 | < th | dose dependent | sin | 20 | NA |
| 64 | 243.07 | temperature | 25 | 270 | > th | dose dependent | sin | 10 | NA |
| 74 | 243.34 | humidity | 70 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 84 | 243.53 | humidity | 70 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 139 | 244.01 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 143 | 244.04 | humidity | 70 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 167 | 244.28 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 168 | 244.32 | wind | 1 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 221 | 244.63 | humidity | 60 | 43200 | > th | dose dependent | rect. | 12 | 17 |
| 232 | 244.68 | humidity | 60 | 43200 | > th | dose dependent | rect. | 16 | 13 |
| 285 | 244.86 | humidity | 60 | 43200 | > th | dose dependent | sin | 15 | NA |
| 304 | 244.92 | temperature | 15 | 1440 | > th | dose dependent | rect. | 9 | 15 |
| 331 | 244.99 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 13 |
| 339 | 245.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 19 |
| 377 | 245.12 | temperature | 10 | 4320 | > th | dose dependent | sin | 17 | NA |
| 389 | 245.13 | radiation | 1 | 30 | < th | dose dependent | rect. | 6 | 14 |
| 469 | 245.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 487 | 245.33 | temperature | 25 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 536 | 245.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 22 |
| 537 | 245.44 | temperature | 25 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 572 | 245.48 | radiation | 1 | 4320 | < th | dose dependent | rect. | 8 | 22 |
| 573 | 245.49 | temperature | 25 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 591 | 245.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 21 |
| 629 | 245.58 | temperature | 30 | 4320 | < th | dose dependent | sin | 16 | NA |
| 716 | 245.67 | radiation | 1 | 30 | < th | dose dependent | rect. | 11 | 9 |
| 755 | 245.71 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 777 | 245.73 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 15 |
| 812 | 245.77 | radiation | 1 | 30 | < th | dose dependent | rect. | 13 | 7 |
| 820 | 245.77 | humidity | 70 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 879 | 245.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 898 | 245.85 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 902 | 245.86 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 943 | 245.91 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 948 | 245.91 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 18 |
| 966 | 245.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 16 |