Os01g0793200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0793200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein prenyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.91 | 0.441 | 9.07 | 0.853 | 1.47 | 0.739 | 0.319 | -0.785 | -0.107 | 17.1 | 25.5 | 20 | -- | -- |
| 88.11 | 0.437 | 9.06 | 0.936 | 1.48 | 0.674 | 0.22 | -- | -0.0832 | 17.1 | 25.55 | 18 | -- | -- |
| 88.12 | 0.437 | 9.06 | 0.873 | 1.47 | 0.735 | -- | -0.557 | -0.0964 | 17.1 | 25.6 | 17 | -- | -- |
| 88.23 | 0.437 | 9.05 | 0.934 | 1.47 | 0.68 | -- | -- | -0.0818 | 17.1 | 25.54 | 17 | -- | -- |
| 152.29 | 0.575 | 9.1 | 0.383 | -- | 2.01 | -- | -2.29 | -0.338 | -- | 24.4 | 220 | -- | -- |
| 94.74 | 0.456 | 9.05 | 1.03 | 1.69 | -- | 0.414 | -- | -0.0451 | 16.8 | -- | -- | -- | -- |
| 95.18 | 0.457 | 9.05 | 1.04 | 1.69 | -- | -- | -- | -0.043 | 16.8 | -- | -- | -- | -- |
| 154.3 | 0.579 | 9.07 | 0.675 | -- | 1.83 | -- | -- | -0.268 | -- | 24.3 | 219 | -- | -- |
| 110.38 | 0.489 | 9.08 | -- | 1.38 | 0.921 | -- | -- | -0.199 | 17.2 | 25.5 | 17 | -- | -- |
| 247.09 | 0.735 | 9.03 | 0.973 | -- | -- | -- | -- | -0.087 | -- | -- | -- | -- | -- |
| 123.5 | 0.52 | 9.07 | -- | 1.68 | -- | -- | -- | -0.158 | 16.8 | -- | -- | -- | -- |
| 166.24 | 0.601 | 9.09 | -- | -- | 1.92 | -- | -- | -0.343 | -- | 24.3 | 235 | -- | -- |
| 272.06 | 0.77 | 9.06 | -- | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 2 | 81.94 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 3 | 81.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 5 | 82.17 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 7 | 82.23 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 43 | 83.26 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 48 | 83.33 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 82 | 84.08 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 93 | 84.19 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 3 |
| 124 | 84.59 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 9 |
| 133 | 84.71 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 144 | 84.86 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 145 | 84.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 146 | 84.87 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 188 | 85.32 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 218 | 85.55 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 224 | 85.62 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 24 | 8 |
| 230 | 85.65 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 231 | 85.65 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 232 | 85.65 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 240 | 85.69 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 245 | 85.72 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 16 |
| 255 | 85.76 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 289 | 85.90 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 295 | 85.92 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 307 | 85.96 | temperature | 10.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 339 | 86.04 | temperature | 30.0 | 30 | < th | dose dependent | sin | 0 | NA |
| 344 | 86.05 | temperature | 10.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 361 | 86.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 374 | 86.13 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 22 | 4 |
| 376 | 86.14 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 401 | 86.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 415 | 86.28 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 19 |
| 426 | 86.30 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 431 | 86.32 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 465 | 86.39 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 478 | 86.43 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 486 | 86.45 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 490 | 86.46 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 498 | 86.48 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 5 |
| 505 | 86.50 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 514 | 86.52 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 542 | 86.59 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 4 |
| 544 | 86.60 | wind | 7.0 | 30 | < th | dose independent | rect. | 8 | 20 |
| 547 | 86.60 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 23 | 4 |
| 556 | 86.62 | radiation | 1.0 | 30 | > th | dose independent | rect. | 8 | 11 |
| 606 | 86.66 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 623 | 86.69 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 633 | 86.70 | humidity | 70.0 | 90 | > th | dose independent | rect. | 13 | 19 |
| 656 | 86.74 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 667 | 86.77 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 670 | 86.77 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 677 | 86.78 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 689 | 86.80 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 716 | 86.84 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 735 | 86.87 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 753 | 86.88 | humidity | 90.0 | 10 | < th | dose independent | rect. | 17 | 15 |
| 761 | 86.89 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 22 | 6 |
| 766 | 86.90 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 9 |
| 773 | 86.91 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 777 | 86.92 | wind | 5.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 794 | 86.93 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 798 | 86.94 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 20 |
| 807 | 86.94 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 20 |
| 810 | 86.95 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 812 | 86.96 | wind | 5.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 814 | 86.96 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 9 |
| 823 | 86.97 | radiation | 10.0 | 720 | > th | dose independent | rect. | 8 | 2 |
| 824 | 86.97 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 854 | 87.02 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 872 | 87.04 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 894 | 87.07 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 904 | 87.09 | radiation | 10.0 | 270 | > th | dose independent | sin | 3 | NA |
| 905 | 87.09 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 4 |
| 913 | 87.10 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 920 | 87.11 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 19 |
| 925 | 87.11 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 936 | 87.13 | humidity | 90.0 | 10 | < th | dose independent | rect. | 15 | 17 |
| 944 | 87.13 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 946 | 87.14 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 12 |
| 956 | 87.15 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 17 |