Os01g0791500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ATPase subunit 6.
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Os01g0791500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ATPase subunit 6.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.48 | 0.473 | 7.91 | 2.02 | 0.464 | 0.82 | 0.671 | -2.34 | 0.886 | 2.59 | 26.7 | 250 | -- | -- |
| 107.8 | 0.484 | 7.96 | 1.58 | 0.412 | 0.951 | 0.108 | -- | 0.794 | 2.73 | 26.7 | 214 | -- | -- |
| 102.77 | 0.472 | 7.92 | 1.97 | 0.481 | 0.82 | -- | -2.05 | 0.871 | 2.6 | 26.73 | 275 | -- | -- |
| 107.77 | 0.483 | 7.96 | 1.59 | 0.425 | 0.949 | -- | -- | 0.791 | 2.91 | 26.65 | 212 | -- | -- |
| 108.46 | 0.485 | 7.92 | 1.99 | -- | 1.35 | -- | -1.89 | 0.888 | -- | 31 | 129 | -- | -- |
| 120.9 | 0.515 | 8.01 | 1.35 | 0.645 | -- | 0.0152 | -- | 0.581 | 3.21 | -- | -- | -- | -- |
| 120.9 | 0.515 | 8.01 | 1.35 | 0.646 | -- | -- | -- | 0.581 | 3.22 | -- | -- | -- | -- |
| 112.32 | 0.494 | 7.95 | 1.67 | -- | 1.31 | -- | -- | 0.831 | -- | 30.4 | 121 | -- | -- |
| 167.15 | 0.605 | 8.03 | -- | 0.569 | 0.38 | -- | -- | 0.476 | 3.39 | 45.07 | 137 | -- | -- |
| 144.55 | 0.562 | 8 | 1.37 | -- | -- | -- | -- | 0.598 | -- | -- | -- | -- | -- |
| 168.69 | 0.608 | 8.04 | -- | 0.672 | -- | -- | -- | 0.431 | 3.22 | -- | -- | -- | -- |
| 180.18 | 0.627 | 8.01 | -- | -- | 0.961 | -- | -- | 0.555 | -- | 53.55 | 36 | -- | -- |
| 194.35 | 0.651 | 8.04 | -- | -- | -- | -- | -- | 0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 5 | 98.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 26 | 100.62 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 17 |
| 27 | 100.62 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 42 | 100.98 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 47 | 101.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 51 | 101.23 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 62 | 101.57 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 6 |
| 71 | 101.64 | radiation | 1 | 4320 | > th | dose independent | rect. | 5 | 6 |
| 79 | 101.68 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 86 | 101.79 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 96 | 101.84 | radiation | 1 | 4320 | < th | dose independent | rect. | 22 | 13 |
| 143 | 102.05 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 152 | 102.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 18 | 23 |
| 165 | 102.28 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 172 | 102.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 175 | 102.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 180 | 102.50 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 184 | 102.53 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 194 | 102.56 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 204 | 102.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 13 |
| 206 | 102.59 | radiation | 1 | 4320 | < th | dose independent | sin | 10 | NA |
| 221 | 102.62 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 5 |
| 222 | 102.63 | radiation | 1 | 4320 | > th | dose independent | sin | 10 | NA |
| 223 | 102.63 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 231 | 102.68 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 232 | 102.68 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 236 | 102.70 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 238 | 102.71 | temperature | 20 | 30 | > th | dose independent | rect. | 7 | 21 |
| 240 | 102.73 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 245 | 102.75 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 247 | 102.76 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 249 | 102.76 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 12 |
| 252 | 102.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 255 | 102.77 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 277 | 102.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 282 | 102.91 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 287 | 102.94 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 293 | 102.95 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 313 | 103.00 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 322 | 103.04 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 9 |
| 329 | 103.05 | temperature | 10 | 30 | > th | dose dependent | sin | 3 | NA |
| 330 | 103.05 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 337 | 103.07 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 13 |
| 355 | 103.11 | humidity | 80 | 14400 | > th | dose dependent | sin | 10 | NA |
| 359 | 103.12 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 407 | 103.21 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 416 | 103.23 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 422 | 103.23 | temperature | 25 | 270 | < th | dose independent | rect. | 18 | 23 |
| 470 | 103.33 | humidity | 80 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 472 | 103.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 478 | 103.34 | temperature | 25 | 270 | < th | dose dependent | sin | 0 | NA |
| 485 | 103.35 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 23 |
| 497 | 103.38 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 502 | 103.38 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 7 |
| 514 | 103.39 | radiation | 1 | 4320 | < th | dose dependent | rect. | 19 | 16 |
| 523 | 103.40 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 11 |
| 524 | 103.40 | radiation | 1 | 4320 | < th | dose dependent | rect. | 22 | 13 |
| 550 | 103.42 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 555 | 103.43 | humidity | 90 | 14400 | > th | dose independent | sin | 9 | NA |
| 567 | 103.44 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 586 | 103.48 | radiation | 1 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 611 | 103.51 | humidity | 90 | 14400 | < th | dose independent | sin | 9 | NA |
| 627 | 103.52 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 657 | 103.55 | temperature | 15 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 754 | 103.67 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 802 | 103.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 809 | 103.75 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 868 | 103.83 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 10 |
| 939 | 103.93 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |
| 946 | 103.94 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 952 | 103.94 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 959 | 103.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 991 | 103.99 | temperature | 25 | 270 | < th | dose independent | rect. | 21 | 23 |
| 999 | 103.99 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |