Os01g0789100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CDP-alcohol phosphatidyltransferase family protein.
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Os01g0789100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CDP-alcohol phosphatidyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.02 | 0.436 | 7.35 | 1.71 | 0.853 | 0.123 | 0.419 | -2.42 | 0.385 | 17.1 | 19.67 | 4347 | -- | -- |
| 90.01 | 0.442 | 7.34 | 1.56 | 0.844 | 0.294 | 0.315 | -- | 0.394 | 17.4 | 41.12 | 1330 | -- | -- |
| 86.46 | 0.433 | 7.35 | 1.71 | 0.853 | 0.123 | -- | -2.43 | 0.386 | 17.1 | 19.67 | 4353 | -- | -- |
| 90.19 | 0.442 | 7.33 | 1.56 | 0.845 | 0.295 | -- | -- | 0.403 | 17.4 | 79.66 | 1309 | -- | -- |
| 124.8 | 0.52 | 7.34 | 1.66 | -- | 0.173 | -- | -2.24 | 0.361 | -- | 20 | 4322 | -- | -- |
| 92.69 | 0.451 | 7.34 | 1.53 | 0.844 | -- | 0.403 | -- | 0.327 | 17.1 | -- | -- | -- | -- |
| 93.1 | 0.452 | 7.34 | 1.54 | 0.847 | -- | -- | -- | 0.329 | 17.1 | -- | -- | -- | -- |
| 126.57 | 0.524 | 7.31 | 1.56 | -- | 0.329 | -- | -- | 0.387 | -- | 95.92 | 1371 | -- | -- |
| 151.24 | 0.573 | 7.34 | -- | 0.78 | 0.314 | -- | -- | 0.287 | 17.3 | 60 | 8599 | -- | -- |
| 130.7 | 0.534 | 7.33 | 1.51 | -- | -- | -- | -- | 0.307 | -- | -- | -- | -- | -- |
| 155.21 | 0.583 | 7.38 | -- | 0.821 | -- | -- | -- | 0.158 | 17.2 | -- | -- | -- | -- |
| 177.11 | 0.62 | 7.37 | -- | -- | 0.74 | -- | -- | 0.144 | -- | 80.74 | 47520 | -- | -- |
| 190.45 | 0.644 | 7.37 | -- | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.45 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 2 | 81.60 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 3 | 81.65 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 13 | 82.39 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 19 | 82.65 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 27 | 83.16 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 59 | 83.75 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 65 | 83.86 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 69 | 83.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 76 | 83.98 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 78 | 83.99 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 81 | 84.04 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 88 | 84.10 | wind | 1.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 90 | 84.11 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 94 | 84.13 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 101 | 84.18 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 103 | 84.19 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 119 | 84.21 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 127 | 84.23 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 130 | 84.25 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 131 | 84.25 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 138 | 84.29 | radiation | 20.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 141 | 84.29 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 147 | 84.32 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 170 | 84.36 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 197 | 84.38 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 200 | 84.38 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 205 | 84.39 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 209 | 84.40 | radiation | 40.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 210 | 84.40 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 211 | 84.40 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 240 | 84.43 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 269 | 84.44 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 270 | 84.44 | radiation | 30.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 273 | 84.44 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 278 | 84.45 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 305 | 84.46 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 13 | 21 |
| 453 | 84.51 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 470 | 84.51 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 601 | 84.54 | radiation | 10.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 609 | 84.55 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 617 | 84.56 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 722 | 84.60 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 778 | 84.62 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 15 |
| 807 | 84.64 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 813 | 84.64 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 821 | 84.65 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 822 | 84.65 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 835 | 84.65 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 839 | 84.66 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 20 |
| 845 | 84.66 | wind | 7.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 874 | 84.66 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 906 | 84.67 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 959 | 84.67 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 960 | 84.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 971 | 84.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |