Os01g0787600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Salicylic acid-binding protein 2.
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Os01g0787600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Salicylic acid-binding protein 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 411.57 | 0.953 | 7.32 | -0.852 | 2.1 | 1.62 | 0.12 | -2.59 | 0.0118 | 3.2 | 18.34 | 1398 | 11 | 2.32 |
| 428.93 | 0.965 | 7.33 | -0.955 | 2.1 | 1.7 | 0.155 | -- | 0.004 | 3.19 | 18.4 | 1393 | 10.8 | 2.52 |
| 411.27 | 0.945 | 7.32 | -0.853 | 2.1 | 1.63 | -- | -2.55 | 0.0129 | 3.22 | 18.24 | 1395 | 10.9 | 2.41 |
| 428.84 | 0.964 | 7.33 | -0.939 | 2.1 | 1.68 | -- | -- | -0.017 | 3.22 | 18.41 | 1393 | 10.8 | 2.52 |
| 650.96 | 1.19 | 7.32 | -0.798 | -- | 1.71 | -- | -2.43 | 0.00559 | -- | 18.33 | 1359 | 10.9 | 2.35 |
| 535.6 | 1.08 | 7.45 | -1.21 | 2.12 | -- | -0.00125 | -- | -0.523 | 3.08 | -- | -- | -- | -- |
| 535.6 | 1.08 | 7.45 | -1.21 | 2.12 | -- | -- | -- | -0.523 | 3.08 | -- | -- | -- | -- |
| 664.4 | 1.2 | 7.32 | -0.839 | -- | 1.9 | -- | -- | 0.0302 | -- | 18.78 | 1355 | 11 | 2.37 |
| 452.44 | 0.991 | 7.33 | -- | 2.09 | 1.75 | -- | -- | 0.0258 | 3.23 | 18.26 | 1393 | 10.8 | 2.52 |
| 792.39 | 1.32 | 7.45 | -1.12 | -- | -- | -- | -- | -0.467 | -- | -- | -- | -- | -- |
| 574.32 | 1.12 | 7.42 | -- | 2.1 | -- | -- | -- | -0.388 | 3.08 | -- | -- | -- | -- |
| 680.56 | 1.22 | 7.33 | -- | -- | 1.96 | -- | -- | 0.127 | -- | 20.01 | 1350 | 11 | 2.35 |
| 825.59 | 1.34 | 7.42 | -- | -- | -- | -- | -- | -0.343 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 425.23 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 2 | 425.97 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 3 | 426.22 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 4 | 426.50 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 7 | 427.16 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 8 | 427.38 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 9 | 427.60 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 14 | 428.57 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 25 | 429.38 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 35 | 430.20 | wind | 9.0 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 48 | 431.32 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 51 | 432.17 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 67 | 433.88 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 69 | 434.13 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 72 | 434.25 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 74 | 434.40 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 79 | 434.69 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 81 | 434.78 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 82 | 434.79 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 91 | 435.10 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 92 | 435.12 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 93 | 435.13 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 96 | 435.14 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 102 | 435.23 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 104 | 435.28 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 128 | 436.49 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 130 | 436.54 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 131 | 436.56 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 133 | 436.60 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 143 | 436.76 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 155 | 437.13 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 162 | 437.54 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 164 | 437.66 | radiation | 20.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 183 | 438.17 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 7 |
| 191 | 438.24 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 192 | 438.24 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 193 | 438.25 | humidity | 90.0 | 720 | < th | dose independent | rect. | 21 | 3 |
| 200 | 438.48 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 215 | 438.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 290 | 439.68 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 301 | 439.83 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 7 |
| 306 | 439.87 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 11 |
| 307 | 439.89 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 309 | 439.90 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 312 | 439.94 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 315 | 439.95 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 320 | 439.99 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 323 | 440.01 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 331 | 440.08 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 343 | 440.17 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 348 | 440.19 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 362 | 440.26 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 435 | 440.64 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 2 | 18 |
| 440 | 440.66 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 474 | 440.78 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 477 | 440.79 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 23 | 21 |
| 490 | 440.84 | radiation | 20.0 | 1440 | < th | dose dependent | no | NA | NA |
| 565 | 441.29 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 617 | 441.62 | radiation | 10.0 | 1440 | < th | dose independent | sin | 18 | NA |
| 701 | 442.22 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 702 | 442.23 | radiation | 20.0 | 1440 | < th | dose independent | sin | 21 | NA |
| 912 | 442.82 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 3 | 1 |
| 936 | 442.96 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 968 | 443.09 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 980 | 443.15 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 2 |
| 985 | 443.22 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 990 | 443.29 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |