Os01g0787400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0787400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.88 | 0.409 | 9.56 | -0.554 | 2.09 | -0.661 | 0.251 | 0.767 | -0.0224 | 8.22 | 90.94 | 14 | -- | -- |
| 76.93 | 0.412 | 9.57 | -0.535 | 2.09 | -0.62 | 0.188 | -- | -0.00983 | 8.18 | 90.64 | 13 | -- | -- |
| 76.01 | 0.409 | 9.56 | -0.545 | 2.09 | -0.66 | -- | 0.709 | -0.0161 | 8.2 | 90.86 | 13 | -- | -- |
| 77 | 0.411 | 9.57 | -0.53 | 2.09 | -0.611 | -- | -- | -0.00942 | 8.18 | 90.52 | 13 | -- | -- |
| 311.59 | 0.822 | 9.6 | -0.565 | -- | -0.3 | -- | 1.19 | 0.0633 | -- | 91 | 5 | -- | -- |
| 85.79 | 0.434 | 9.55 | -0.607 | 2.02 | -- | 0.0515 | -- | 0.0928 | 8.7 | -- | -- | -- | -- |
| 85.8 | 0.434 | 9.55 | -0.605 | 2.02 | -- | -- | -- | 0.0928 | 8.7 | -- | -- | -- | -- |
| 305.32 | 0.817 | 9.61 | -0.584 | -- | -0.46 | -- | -- | 0.0893 | -- | 61.95 | 9 | -- | -- |
| 84.25 | 0.43 | 9.56 | -- | 2.1 | -0.682 | -- | -- | 0.0361 | 8.14 | 90.45 | 13 | -- | -- |
| 316.46 | 0.831 | 9.6 | -0.601 | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
| 95.45 | 0.457 | 9.53 | -- | 2.02 | -- | -- | -- | 0.16 | 8.72 | -- | -- | -- | -- |
| 314.29 | 0.828 | 9.59 | -- | -- | -0.464 | -- | -- | 0.151 | -- | 63 | 2 | -- | -- |
| 325.98 | 0.843 | 9.59 | -- | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.78 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 8 | 73.06 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 14 |
| 33 | 73.56 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 44 | 73.71 | humidity | 90.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 50 | 73.77 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 61 | 74.02 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 8 |
| 83 | 74.46 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 1 | 16 |
| 91 | 74.66 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 1 | 18 |
| 93 | 74.67 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 18 |
| 100 | 74.88 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 104 | 75.01 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 15 |
| 108 | 75.08 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 22 | 11 |
| 111 | 75.11 | radiation | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 134 | 75.25 | radiation | 10.0 | 30 | < th | dose dependent | sin | 3 | NA |
| 136 | 75.27 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 22 | 16 |
| 140 | 75.28 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 173 | 75.52 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 180 | 75.53 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 184 | 75.54 | atmosphere | 1005.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 185 | 75.54 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 7 | 1 |
| 186 | 75.54 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 187 | 75.54 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 197 | 75.56 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 199 | 75.57 | humidity | 90.0 | 30 | > th | dose independent | sin | 7 | NA |
| 212 | 75.60 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 233 | 75.67 | radiation | 1.0 | 90 | > th | dose independent | sin | 4 | NA |
| 265 | 75.83 | wind | 1.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 267 | 75.84 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 269 | 75.84 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 13 | 20 |
| 294 | 75.91 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 356 | 76.07 | radiation | 1.0 | 30 | < th | dose independent | rect. | 3 | 16 |
| 367 | 76.11 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 18 | 20 |
| 372 | 76.12 | humidity | 90.0 | 10 | > th | dose dependent | no | NA | NA |
| 397 | 76.17 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 1 | 18 |
| 400 | 76.17 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 428 | 76.22 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 12 | 7 |
| 454 | 76.26 | humidity | 90.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 462 | 76.27 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 1 | 16 |
| 468 | 76.30 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 6 |
| 474 | 76.33 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 14 |
| 479 | 76.35 | wind | 1.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 482 | 76.35 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 9 |
| 499 | 76.38 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 501 | 76.38 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 1 | 11 |
| 507 | 76.40 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 517 | 76.41 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 24 | 12 |
| 519 | 76.41 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 523 | 76.43 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 16 |
| 524 | 76.43 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 21 |
| 531 | 76.45 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 1 | 18 |
| 557 | 76.48 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 1 | 9 |
| 562 | 76.49 | wind | 7.0 | 720 | < th | dose independent | rect. | 19 | 8 |
| 563 | 76.49 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 9 |
| 583 | 76.52 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 16 |
| 584 | 76.53 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 1 |
| 585 | 76.53 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 7 |
| 586 | 76.53 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 593 | 76.55 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 595 | 76.56 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 649 | 76.62 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 17 |
| 658 | 76.64 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 19 | 17 |
| 666 | 76.66 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 23 | 13 |
| 677 | 76.68 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 679 | 76.69 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 687 | 76.71 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 702 | 76.73 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 23 |
| 711 | 76.74 | wind | 9.0 | 720 | < th | dose independent | rect. | 15 | 16 |
| 733 | 76.78 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 745 | 76.80 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 777 | 76.88 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 790 | 76.90 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 14 |
| 805 | 76.93 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 844 | 77.00 | radiation | 1.0 | 30 | < th | dose independent | rect. | 3 | 13 |
| 854 | 77.02 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 862 | 77.03 | humidity | 90.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 863 | 77.03 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 866 | 77.04 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 871 | 77.05 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 2 |
| 883 | 77.07 | wind | 9.0 | 4320 | < th | dose independent | rect. | 2 | 5 |
| 902 | 77.10 | temperature | 15.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 915 | 77.12 | humidity | 90.0 | 10 | < th | dose independent | sin | 6 | NA |
| 972 | 77.19 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 975 | 77.19 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 982 | 77.20 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 1 |