Os01g0784500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor-like protein kinase 4.
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Os01g0784500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor-like protein kinase 4.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 401.66 | 0.942 | 5.35 | -3.02 | 1.65 | -0.144 | -1 | -11.3 | -0.294 | 2.72 | 19.91 | 4060 | -- | -- |
| 510.53 | 1.06 | 4.91 | 0.0102 | 1.44 | -0.387 | -1.7 | -- | 0.554 | 2.76 | 19.91 | 4060 | -- | -- |
| 404.95 | 0.937 | 5.36 | -3.08 | 1.65 | -0.128 | -- | -11.6 | -0.303 | 2.71 | 20.11 | 4027 | -- | -- |
| 475.36 | 1.02 | 4.95 | 0.287 | 1.7 | -1.21 | -- | -- | 0.354 | 2.72 | 29.5 | 4023 | -- | -- |
| 560.64 | 1.1 | 5.36 | -2.99 | -- | 0.16 | -- | -11.1 | -0.297 | -- | 19.69 | 4000 | -- | -- |
| 512.75 | 1.06 | 4.93 | -0.0694 | 1.59 | -- | -1.6 | -- | 0.489 | 2.73 | -- | -- | -- | -- |
| 521.69 | 1.07 | 4.92 | -0.0303 | 1.58 | -- | -- | -- | 0.498 | 2.72 | -- | -- | -- | -- |
| 600.45 | 1.15 | 4.92 | 0.229 | -- | -2.1 | -- | -- | 0.507 | -- | 27.96 | 4754 | -- | -- |
| 476.34 | 1.02 | 4.97 | -- | 1.68 | -1.12 | -- | -- | 0.282 | 2.66 | 29.8 | 4139 | -- | -- |
| 667.02 | 1.21 | 4.91 | 0.037 | -- | -- | -- | -- | 0.538 | -- | -- | -- | -- | -- |
| 521.71 | 1.07 | 4.92 | -- | 1.58 | -- | -- | -- | 0.502 | 2.72 | -- | -- | -- | -- |
| 601.8 | 1.15 | 4.93 | -- | -- | -2.06 | -- | -- | 0.482 | -- | 27.96 | 4754 | -- | -- |
| 667.05 | 1.21 | 4.91 | -- | -- | -- | -- | -- | 0.534 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 395.73 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 2 | 395.81 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 7 | 397.82 | radiation | 20 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 21 | 398.77 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 23 | 398.97 | temperature | 20 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 24 | 399.04 | temperature | 20 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 26 | 399.21 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 28 | 399.27 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 42 | 399.45 | temperature | 25 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 44 | 399.55 | wind | 9 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 45 | 399.67 | temperature | 25 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 46 | 399.75 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 63 | 400.70 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 67 | 400.88 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 79 | 401.52 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 19 |
| 121 | 402.16 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 151 | 402.52 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 161 | 402.61 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 175 | 402.67 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 187 | 402.77 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 188 | 402.77 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 203 | 402.86 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 23 |
| 209 | 402.90 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 9 |
| 223 | 402.95 | temperature | 20 | 4320 | > th | dose dependent | sin | 18 | NA |
| 224 | 402.95 | temperature | 20 | 4320 | > th | dose dependent | rect. | 16 | 6 |
| 247 | 403.11 | temperature | 25 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 252 | 403.14 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 270 | 403.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 11 |
| 295 | 403.39 | temperature | 25 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 329 | 403.66 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 7 |
| 338 | 403.71 | temperature | 20 | 4320 | > th | dose dependent | sin | 4 | NA |
| 381 | 403.98 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 388 | 404.05 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 15 |
| 423 | 404.22 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 481 | 404.62 | temperature | 20 | 43200 | > th | dose independent | sin | 11 | NA |
| 556 | 405.09 | radiation | 40 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 592 | 405.29 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 596 | 405.30 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 609 | 405.38 | temperature | 20 | 43200 | < th | dose independent | sin | 11 | NA |
| 722 | 406.01 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 742 | 406.10 | humidity | 80 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 766 | 406.17 | temperature | 25 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 794 | 406.23 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 803 | 406.29 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 808 | 406.30 | radiation | 30 | 4320 | > th | dose dependent | rect. | 14 | 19 |
| 828 | 406.37 | temperature | 30 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 844 | 406.42 | temperature | 20 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 891 | 406.52 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 6 |