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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0782300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.79 (0.0381) R2 : 0.767
β1 : 4.28 (0.166) R2dD : 0.568 R2D : 0.437
β2 : 1.61 (0.0937) R2dC : 0.157 R2C : 0.109
β3 : -2.19 (0.154) R2dE : 0.123 R2E : 0.171
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -4.09 (0.597) R2dD*E : 0.0387 R2D*E : -0.176
γ1 : 0.553 (0.0851) R2dN8 : 0.0359 R2N8 : 0.00173
σ : 0.673
deviance : 205.57
__
_____
C
peak time of C : 7.02
E
wheather : temperature
threshold : 30.77
memory length : 9
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
201.54 0.667 4.79 4.24 1.63 -2.28 1.26 -4.12 0.543 6.93 30.9 10 -- --
221.38 0.693 4.86 3.6 1.61 -2.56 1.36 -- 0.406 7.2 39.72 10 -- --
205.57 0.673 4.79 4.28 1.61 -2.19 -- -4.09 0.553 7.02 30.77 9 -- --
225.82 0.7 4.86 3.62 1.61 -2.58 -- -- 0.408 7.09 44.89 10 -- --
335.87 0.854 4.82 4.37 -- -1.86 -- -3.86 0.581 -- 27.8 5 -- --
282.59 0.788 4.77 4.08 1.54 -- 1.39 -- 0.773 8.97 -- -- -- --
289.12 0.796 4.77 4.12 1.54 -- -- -- 0.773 8.88 -- -- -- --
355.44 0.878 4.89 3.72 -- -1.83 -- -- 0.446 -- 30.1 3 -- --
537.7 1.08 5 -- 1.86 -4.32 -- -- -0.228 5.98 52.26 13 -- --
423.73 0.962 4.82 4.12 -- -- -- -- 0.784 -- -- -- -- --
737.16 1.27 4.88 -- 1.55 -- -- -- 0.314 8.68 -- -- -- --
697.95 1.23 5.02 -- -- -2.83 -- -- -0.136 -- 29.8 3 -- --
872.18 1.38 4.92 -- -- -- -- -- 0.327 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 191.55 temperature 10 10 > th dose dependent rect. 3 23
4 193.06 temperature 10 270 > th dose dependent rect. 3 22
12 197.17 temperature 30 10 < th dose dependent rect. 7 23
20 198.49 temperature 25 1440 < th dose dependent rect. 21 1
24 200.09 temperature 30 10 < th dose dependent rect. 1 23
31 201.02 temperature 20 10 > th dose dependent rect. 23 23
34 201.12 temperature 30 10 < th dose dependent rect. 9 23
35 201.31 temperature 20 10 > th dose dependent rect. 21 23
42 201.95 temperature 20 720 > th dose dependent rect. 23 10
43 201.97 temperature 30 10 < th dose dependent rect. 11 23
45 202.03 temperature 30 10 < th dose dependent no NA NA
48 202.36 temperature 30 10 < th dose dependent rect. 15 23
51 202.50 temperature 20 720 > th dose dependent rect. 21 12
52 202.57 temperature 30 10 < th dose dependent rect. 13 23
54 202.58 temperature 30 270 < th dose dependent rect. 22 22
61 203.01 temperature 20 10 > th dose dependent no NA NA
70 203.25 temperature 30 10 < th dose dependent rect. 17 23
107 204.66 temperature 20 720 > th dose dependent sin 8 NA
109 204.73 temperature 30 10 < th dose dependent rect. 19 23
121 205.06 temperature 20 10 > th dose dependent rect. 17 23
140 205.64 temperature 20 10 > th dose dependent rect. 15 23
142 205.69 temperature 10 720 > th dose dependent rect. 19 14
145 205.85 temperature 20 720 > th dose dependent rect. 3 5
158 206.13 temperature 20 10 > th dose dependent sin 5 NA
183 206.71 temperature 20 10 > th dose dependent rect. 1 23
184 206.80 temperature 10 720 > th dose dependent rect. 21 18
189 206.89 temperature 30 10 < th dose dependent rect. 21 23
192 206.98 temperature 30 10 < th dose dependent rect. 23 23
233 207.76 temperature 25 720 < th dose dependent rect. 17 19
234 207.77 temperature 25 1440 < th dose dependent sin 16 NA
263 208.15 temperature 30 10 < th dose dependent sin 4 NA
273 208.27 temperature 25 720 < th dose dependent rect. 1 22
339 208.96 temperature 25 720 < th dose dependent no NA NA
360 209.18 temperature 25 720 < th dose dependent rect. 19 23
367 209.24 temperature 25 720 < th dose dependent rect. 9 23
374 209.29 temperature 25 720 < th dose dependent rect. 6 23
411 209.60 temperature 20 1440 > th dose dependent rect. 24 1
464 210.05 temperature 20 10 > th dose dependent rect. 6 16
491 210.26 temperature 15 270 > th dose dependent rect. 16 23
581 210.93 temperature 30 720 < th dose dependent sin 8 NA
582 210.93 temperature 25 720 < th dose dependent sin 10 NA
659 211.53 temperature 15 1440 > th dose dependent rect. 21 1
697 211.77 temperature 30 270 < th dose dependent rect. 23 15
703 211.81 temperature 20 10 > th dose dependent rect. 23 21
728 212.03 temperature 30 720 < th dose dependent rect. 23 11
778 212.38 temperature 10 1440 > th dose dependent rect. 20 5
802 212.51 temperature 20 4320 > th dose independent rect. 20 3
876 212.94 temperature 20 4320 < th dose independent rect. 20 3