Os01g0779300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Legume lectin, beta domain containing protein.
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Os01g0779300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Legume lectin, beta domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.86 | 0.239 | 10.1 | 1.95 | 0.377 | -0.947 | -0.1 | 1.92 | 0.501 | 21.7 | 19.41 | 1242 | -- | -- |
| 31.25 | 0.26 | 10.1 | 1.64 | 0.377 | -1.04 | -0.266 | -- | 0.43 | 20.4 | 12.59 | 6408 | -- | -- |
| 25.89 | 0.237 | 10.1 | 1.95 | 0.38 | -0.949 | -- | 1.89 | 0.499 | 21.8 | 19.41 | 1234 | -- | -- |
| 31.11 | 0.26 | 10.1 | 1.65 | 0.342 | -1.05 | -- | -- | 0.448 | 20.9 | 9.974 | 7655 | -- | -- |
| 32.57 | 0.266 | 10 | 1.96 | -- | -0.893 | -- | 1.82 | 0.502 | -- | 19.58 | 1433 | -- | -- |
| 48.82 | 0.328 | 10.2 | 1.12 | 0.321 | -- | -0.248 | -- | 0.163 | 20.3 | -- | -- | -- | -- |
| 48.96 | 0.328 | 10.2 | 1.12 | 0.32 | -- | -- | -- | 0.162 | 20.6 | -- | -- | -- | -- |
| 37.12 | 0.284 | 10.1 | 1.64 | -- | -1.02 | -- | -- | 0.432 | -- | 9.994 | 7259 | -- | -- |
| 76.12 | 0.406 | 10.2 | -- | 0.469 | -0.518 | -- | -- | 0.119 | 20.7 | 20.5 | 761 | -- | -- |
| 54.73 | 0.346 | 10.1 | 1.12 | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
| 82.19 | 0.424 | 10.2 | -- | 0.317 | -- | -- | -- | 0.0374 | 20.9 | -- | -- | -- | -- |
| 82.71 | 0.424 | 10.2 | -- | -- | -0.365 | -- | -- | 0.107 | -- | 21.52 | 1422 | -- | -- |
| 87.93 | 0.438 | 10.2 | -- | -- | -- | -- | -- | 0.0351 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 10 |
| 2 | 25.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 10 |
| 4 | 25.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 46 | 25.56 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 216 | 25.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 9 |
| 282 | 26.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 345 | 26.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 20 |
| 346 | 26.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 356 | 26.16 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 417 | 26.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 19 |
| 500 | 26.30 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 561 | 26.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 980 | 26.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |