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Os01g0779100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase M16, C-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.88 (0.0192) R2 : 0.815
β1 : 1.61 (0.0715) R2dD : 0.226 R2D : 0.0761
β2 : 1.42 (0.0478) R2dC : 0.394 R2C : 0.477
β3 : -1.49 (0.095) R2dE : 0.127 R2E : 0.0939
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.75 (0.0424) R2dN8 : 0.184 R2N8 : 0.00135
σ : 0.353
deviance : 57.43
__
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C
peak time of C : 22.1
E
wheather : temperature
threshold : 15.14
memory length : 13
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.84 0.354 9.88 1.65 1.41 -1.53 -0.236 0.455 0.758 22.1 15.01 14 -- --
57.04 0.352 9.88 1.61 1.42 -1.47 -0.334 -- 0.75 22.1 15.2 14 -- --
57.05 0.352 9.88 1.69 1.41 -1.56 -- 0.589 0.758 22.1 13.96 13 -- --
57.43 0.353 9.88 1.61 1.42 -1.49 -- -- 0.75 22.1 15.14 13 -- --
164.8 0.601 9.8 1.91 -- -2.14 -- 0.987 0.898 -- 17.4 12 -- --
80.15 0.42 9.93 1.29 1.65 -- -0.227 -- 0.519 23 -- -- -- --
80.37 0.42 9.93 1.3 1.66 -- -- -- 0.52 23 -- -- -- --
165.58 0.602 9.82 1.75 -- -2.16 -- -- 0.854 -- 17.2 4 -- --
118.16 0.509 9.95 -- 1.53 -0.755 -- -- 0.468 22.7 15.14 13 -- --
251 0.74 9.89 1.33 -- -- -- -- 0.533 -- -- -- -- --
124.58 0.522 9.97 -- 1.67 -- -- -- 0.376 23.1 -- -- -- --
241.52 0.724 9.88 -- -- -1.55 -- -- 0.602 -- 19.32 2 -- --
297.85 0.806 9.93 -- -- -- -- -- 0.385 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.05 temperature 30 90 < th dose dependent rect. 23 23
2 56.87 temperature 15 90 > th dose dependent rect. 3 23
3 56.89 temperature 15 10 > th dose dependent no NA NA
5 56.90 temperature 15 10 > th dose dependent rect. 3 23
10 57.27 temperature 30 30 < th dose dependent rect. 9 23
11 57.53 temperature 30 10 < th dose dependent rect. 13 23
14 57.57 temperature 30 90 < th dose dependent rect. 11 23
16 57.80 temperature 30 10 < th dose dependent rect. 23 23
18 57.90 temperature 30 10 < th dose dependent rect. 1 23
20 57.96 temperature 30 10 < th dose dependent rect. 11 23
21 58.01 temperature 30 90 < th dose dependent rect. 1 22
22 58.02 temperature 30 10 < th dose dependent no NA NA
27 58.14 temperature 30 10 < th dose dependent rect. 15 23
30 58.25 temperature 15 90 > th dose dependent rect. 6 23
33 58.41 temperature 30 10 < th dose dependent rect. 17 23
36 58.46 temperature 30 30 < th dose dependent rect. 21 23
54 59.10 temperature 30 30 < th dose dependent rect. 19 23
60 59.25 temperature 20 30 > th dose dependent rect. 19 23
63 59.30 temperature 30 30 < th dose dependent rect. 5 23
66 59.31 temperature 20 10 > th dose dependent rect. 8 23
71 59.39 temperature 25 10 < th dose dependent rect. 2 20
76 59.47 temperature 30 90 < th dose dependent rect. 1 20
88 59.62 temperature 20 10 > th dose dependent rect. 13 23
90 59.66 temperature 30 90 < th dose dependent rect. 15 20
92 59.72 temperature 20 10 > th dose dependent rect. 1 23
101 59.76 temperature 30 30 < th dose dependent rect. 7 23
111 59.91 temperature 15 10 > th dose dependent rect. 8 18
138 60.14 temperature 30 10 < th dose dependent rect. 12 20
145 60.19 temperature 20 10 > th dose dependent rect. 15 23
158 60.31 temperature 15 10 > th dose dependent rect. 8 16
169 60.41 wind 7 43200 > th dose dependent rect. 18 3
189 60.55 temperature 20 10 > th dose dependent rect. 21 23
194 60.58 temperature 30 10 < th dose dependent rect. 14 18
235 60.80 wind 7 43200 > th dose independent rect. 20 1
252 60.87 temperature 30 10 < th dose dependent rect. 3 23
275 60.99 wind 9 43200 > th dose independent rect. 18 4
276 61.00 temperature 20 10 > th dose dependent rect. 17 23
280 61.03 wind 9 43200 > th dose dependent rect. 18 12
299 61.11 wind 9 43200 < th dose independent rect. 19 2
314 61.18 wind 9 43200 > th dose dependent rect. 17 6
351 61.34 wind 9 43200 < th dose independent rect. 18 4
360 61.39 wind 9 43200 > th dose dependent rect. 17 8
393 61.53 wind 9 43200 > th dose independent rect. 18 11
443 61.75 wind 9 43200 < th dose independent rect. 18 7
464 61.83 wind 9 43200 < th dose independent rect. 18 10
482 61.90 radiation 1 43200 < th dose dependent rect. 21 4
571 62.27 radiation 1 43200 < th dose dependent rect. 21 6
615 62.40 temperature 10 30 > th dose dependent sin 5 NA
768 62.94 temperature 20 10 > th dose dependent rect. 11 23
783 63.02 wind 5 43200 > th dose dependent rect. 17 8
803 63.09 wind 5 43200 > th dose independent rect. 17 8
900 63.34 temperature 30 1440 < th dose dependent rect. 17 1
907 63.35 temperature 25 10 < th dose dependent sin 23 NA
909 63.36 temperature 30 30 < th dose dependent sin 5 NA
943 63.44 radiation 1 43200 < th dose dependent rect. 24 1
944 63.44 radiation 1 43200 < th dose dependent rect. 24 3
962 63.49 wind 5 43200 < th dose independent rect. 17 8