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Os01g0778900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.03 (0.0334) R2 : 0.847
β1 : -1.9 (0.123) R2dD : 0.0847 R2D : 0.0664
β2 : 4.1 (0.088) R2dC : 0.755 R2C : 0.643
β3 : -1.23 (0.0918) R2dE : 0.0624 R2E : -0.00149
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.844 (0.0712) R2dN8 : 0.0633 R2N8 : 0.0156
σ : 0.623
deviance : 178.81
__
_____
C
peak time of C : 6.83
E
wheather : temperature
threshold : 19.43
memory length : 223
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 21.3
open length of G : 5.67

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
177.36 0.626 9.03 -1.87 4.08 -1.24 -0.705 0.427 -0.841 6.84 19.6 231 21.2 5.58
177.66 0.621 9.03 -1.89 4.08 -1.24 -0.689 -- -0.851 6.82 19.49 225 21.2 5.63
178.55 0.622 9.03 -1.88 4.09 -1.24 -- 0.344 -0.839 6.83 19.5 225 21.2 5.68
178.81 0.623 9.03 -1.9 4.1 -1.23 -- -- -0.844 6.83 19.43 223 21.3 5.67
878.16 1.39 9.12 -1.9 -- -1.45 -- 0.049 -0.762 -- 18.7 10 20.7 6.24
209.14 0.678 9.03 -2.04 3.93 -- -0.491 -- -0.875 7.6 -- -- -- --
209.81 0.678 9.03 -2.05 3.93 -- -- -- -0.874 7.6 -- -- -- --
614.65 1.16 9.18 -1.94 -- -2.08 -- -- -1.02 -- 17.1 4 17.6 6.38
273.84 0.771 9 -- 4.18 -1.27 -- -- -0.7 6.73 19.3 214 21.1 6.17
1037.74 1.51 9.13 -2 -- -- -- -- -0.815 -- -- -- -- --
320.81 0.838 8.98 -- 3.91 -- -- -- -0.645 7.64 -- -- -- --
596.52 1.14 8.98 -- -- -2.33 -- -- -0.533 -- 18 30 16.3 9.41
1142.94 1.58 9.08 -- -- -- -- -- -0.593 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 179.36 temperature 20.0 270 > th dose independent rect. 21 5
2 179.58 radiation 1.0 90 < th dose independent rect. 21 20
4 180.18 radiation 1.0 90 < th dose dependent rect. 21 21
6 180.32 temperature 20.0 270 > th dose independent rect. 22 3
11 180.80 atmosphere 1000.0 270 > th dose independent rect. 21 5
13 180.88 atmosphere 1000.0 270 > th dose independent rect. 20 7
31 182.92 radiation 1.0 90 < th dose independent rect. 21 11
36 183.01 precipitation 0.1 270 < th dose independent rect. 3 17
37 183.01 precipitation 0.1 270 < th dose dependent rect. 3 17
54 183.53 temperature 30.0 90 < th dose independent rect. 3 9
55 183.58 radiation 40.0 270 < th dose dependent rect. 2 9
56 183.62 radiation 30.0 270 < th dose independent rect. 2 9
58 183.65 radiation 1.0 90 < th dose dependent rect. 21 11
62 183.67 temperature 10.0 270 > th dose dependent rect. 21 5
63 183.70 precipitation 0.1 270 < th dose independent rect. 2 19
64 183.70 precipitation 0.1 270 < th dose dependent rect. 2 19
73 183.99 precipitation 0.1 270 < th dose independent rect. 16 14
74 183.99 precipitation 0.1 270 < th dose dependent rect. 16 14
75 184.05 humidity 50.0 270 > th dose dependent rect. 20 7
80 184.33 humidity 60.0 270 > th dose dependent rect. 21 5
109 185.08 radiation 1.0 1440 < th dose independent rect. 11 1
111 185.08 radiation 1.0 1440 < th dose dependent rect. 11 1
130 185.53 temperature 20.0 10 > th dose independent rect. 22 6
132 185.58 temperature 10.0 270 > th dose independent rect. 20 7
133 185.58 temperature 30.0 270 < th dose independent rect. 20 7
134 185.58 humidity 50.0 270 > th dose independent rect. 20 7
138 185.58 radiation 1.0 270 < th dose independent rect. 20 7
143 185.58 temperature 15.0 270 > th dose independent rect. 7 9
144 185.58 temperature 10.0 270 > th dose independent rect. 3 17
145 185.58 atmosphere 1015.0 270 < th dose independent rect. 3 17
146 185.58 radiation 1.0 270 < th dose dependent rect. 20 7
152 185.63 atmosphere 1005.0 10 < th dose dependent rect. 24 9
158 185.70 wind 9.0 270 < th dose independent rect. 20 7
163 185.77 temperature 15.0 270 > th dose dependent rect. 22 3
172 185.87 precipitation 0.1 270 < th dose independent rect. 20 7
173 185.87 precipitation 0.1 270 < th dose dependent rect. 20 7
183 185.96 radiation 40.0 270 < th dose independent rect. 2 18
184 185.97 humidity 80.0 270 > th dose independent rect. 21 5
195 186.13 precipitation 0.1 270 < th dose independent rect. 1 21
196 186.13 precipitation 0.1 270 < th dose dependent rect. 1 21
197 186.14 wind 9.0 270 < th dose independent rect. 3 17
199 186.20 radiation 1.0 30 < th dose independent sin 9 NA
204 186.21 temperature 20.0 270 > th dose independent rect. 21 18
208 186.29 temperature 10.0 270 > th dose independent rect. 21 5
209 186.29 temperature 30.0 270 < th dose independent rect. 21 5
210 186.29 humidity 50.0 270 > th dose independent rect. 21 5
214 186.29 radiation 1.0 270 < th dose independent rect. 21 5
219 186.29 temperature 10.0 270 > th dose independent rect. 2 19
221 186.29 radiation 1.0 270 < th dose dependent rect. 21 5
233 186.39 wind 9.0 270 < th dose independent rect. 21 5
234 186.39 precipitation 0.1 270 < th dose independent rect. 21 5
236 186.39 precipitation 0.1 270 < th dose dependent rect. 21 5
242 186.46 wind 7.0 270 < th dose independent rect. 16 15
246 186.57 wind 9.0 270 < th dose independent rect. 6 10
257 186.66 precipitation 0.1 270 > th dose independent rect. 2 2
262 186.69 atmosphere 1015.0 270 < th dose independent rect. 2 19
263 186.72 atmosphere 995.0 270 > th dose independent rect. 6 10
264 186.72 precipitation 0.1 270 > th dose dependent rect. 2 2
276 186.81 wind 9.0 270 < th dose independent rect. 2 19
283 186.88 radiation 10.0 1440 > th dose independent rect. 11 2
284 186.90 precipitation 0.1 270 < th dose independent rect. 6 10
285 186.90 precipitation 0.1 270 < th dose dependent rect. 6 10
286 186.91 temperature 10.0 270 > th dose dependent rect. 7 8
292 186.94 radiation 30.0 270 < th dose independent rect. 16 14
295 186.98 humidity 80.0 270 > th dose independent rect. 22 3
320 187.01 atmosphere 1015.0 270 < th dose independent rect. 6 10
321 187.01 temperature 10.0 270 > th dose independent rect. 16 14
326 187.03 temperature 10.0 270 > th dose dependent rect. 21 17
337 187.13 humidity 60.0 270 > th dose dependent rect. 22 3
343 187.16 precipitation 0.1 270 < th dose independent rect. 1 10
344 187.16 precipitation 0.1 270 < th dose dependent rect. 1 10
373 187.36 temperature 10.0 270 > th dose dependent rect. 20 19
381 187.42 radiation 1.0 90 > th dose independent rect. 4 3
396 187.47 humidity 90.0 10 < th dose independent rect. 1 7
403 187.51 atmosphere 995.0 270 > th dose dependent rect. 21 5
433 187.60 humidity 50.0 270 > th dose independent rect. 7 9
451 187.77 radiation 1.0 30 > th dose independent sin 9 NA
472 187.90 wind 1.0 270 > th dose independent rect. 20 7
473 187.91 radiation 20.0 1440 < th dose dependent rect. 11 2
556 188.35 atmosphere 1015.0 270 < th dose independent rect. 21 5
611 188.59 wind 1.0 270 > th dose independent rect. 21 5
618 188.67 radiation 1.0 90 < th dose dependent sin 10 NA
648 188.84 atmosphere 1015.0 270 < th dose independent rect. 20 7
660 188.94 wind 9.0 270 < th dose dependent rect. 21 5
669 188.97 radiation 10.0 1440 < th dose dependent rect. 13 1
678 189.01 atmosphere 1005.0 30 > th dose dependent rect. 3 5
691 189.08 temperature 10.0 270 > th dose independent rect. 22 3
692 189.08 temperature 30.0 270 < th dose independent rect. 22 3
693 189.08 humidity 50.0 270 > th dose independent rect. 22 3
697 189.08 radiation 1.0 270 < th dose independent rect. 22 3
713 189.08 temperature 10.0 270 > th dose independent rect. 1 21
715 189.08 radiation 1.0 270 < th dose dependent rect. 22 3
727 189.10 wind 9.0 270 < th dose independent rect. 22 3
735 189.13 precipitation 0.1 270 < th dose independent rect. 22 3
737 189.13 precipitation 0.1 270 < th dose dependent rect. 22 3
743 189.15 precipitation 0.1 270 < th dose independent rect. 15 6
744 189.15 precipitation 0.1 270 < th dose dependent rect. 15 6
766 189.19 humidity 50.0 270 > th dose independent rect. 21 18
810 189.31 temperature 10.0 270 > th dose independent rect. 1 10
811 189.31 atmosphere 995.0 270 > th dose independent rect. 1 10
812 189.31 atmosphere 1015.0 270 < th dose independent rect. 1 10
813 189.31 temperature 10.0 270 > th dose independent rect. 11 14
826 189.34 temperature 20.0 10 > th dose independent rect. 22 19
828 189.34 radiation 40.0 270 < th dose dependent rect. 2 18
830 189.36 wind 1.0 270 > th dose independent rect. 7 9
833 189.38 radiation 10.0 1440 < th dose dependent rect. 9 6
842 189.41 humidity 70.0 270 > th dose independent rect. 2 9
866 189.53 humidity 90.0 10 < th dose independent rect. 18 14
869 189.54 wind 9.0 270 < th dose independent rect. 21 18
872 189.57 atmosphere 995.0 270 > th dose independent rect. 21 18
884 189.60 wind 9.0 270 < th dose independent rect. 1 21
885 189.61 atmosphere 1005.0 270 > th dose dependent rect. 3 2
891 189.63 wind 9.0 270 < th dose independent rect. 11 14
900 189.66 wind 9.0 270 < th dose independent rect. 1 10
904 189.67 humidity 50.0 90 > th dose independent rect. 17 14
906 189.67 radiation 40.0 270 < th dose dependent rect. 16 15
910 189.70 wind 9.0 270 < th dose independent rect. 15 6
933 189.78 atmosphere 995.0 270 > th dose independent rect. 3 17
963 189.82 radiation 1.0 1440 < th dose independent rect. 9 4
966 189.82 wind 9.0 270 < th dose dependent rect. 22 3
985 189.87 atmosphere 995.0 90 > th dose independent rect. 17 14
989 189.89 radiation 40.0 270 < th dose independent rect. 15 6
1000 189.92 temperature 10.0 270 > th dose independent rect. 15 6