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Os01g0777900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.09 (0.0691) R2 : 0.413
β1 : 1.57 (0.286) R2dD : 0.0638 R2D : -0.105
β2 : -- (--) R2dC : -- R2C : --
β3 : -9.46 (0.556) R2dE : 0.984 R2E : -0.189
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -23 (1.78) R2dD*E : 0.758 R2D*E : -0.893
γ1 : 0.656 (0.142) R2dN8 : 0.042 R2N8 : 0.000837
σ : 1.17
deviance : 631.94
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C
peak time of C : --
E
wheather : radiation
threshold : 1.006
memory length : 1421
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18
open length of G : 23.1

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
612.78 1.16 9.13 1.57 0.806 -9.48 1.76 -22.6 0.649 21.6 1.041 1442 18 23.1
687.25 1.22 9.57 0.32 1.95 -5.05 0.861 -- 0.0661 23.7 3.699 1589 19.2 23.3
617.86 1.16 9.1 1.53 0.677 -9.56 -- -22.9 0.672 20.6 1.008 1432 18 23.1
694.39 1.23 9.54 0.179 1.98 -5.22 -- -- 0.128 0.132 3.699 1598 19.2 23.2
631.94 1.17 9.09 1.57 -- -9.46 -- -23 0.656 -- 1.006 1421 18 23.1
976.22 1.46 9.37 0.833 0.706 -- 2.01 -- 0.792 22.3 -- -- -- --
988.79 1.47 9.37 0.763 0.762 -- -- -- 0.793 21 -- -- -- --
737.65 1.26 9.5 0.0359 -- -4.21 -- -- 0.0935 -- 3.72 1414 18.8 24
691.64 1.22 9.54 -- 2.04 -5.43 -- -- 0.0139 0.161 3.704 1595 19.6 23
1022.1 1.49 9.35 0.764 -- -- -- -- 0.789 -- -- -- -- --
1004.14 1.48 9.39 -- 0.761 -- -- -- 0.708 21.1 -- -- -- --
737.52 1.26 9.51 -- -- -4.25 -- -- 0.0856 -- 3.671 1412 20.3 24
1037.5 1.5 9.37 -- -- -- -- -- 0.704 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 593.24 wind 3 43200 > th dose independent rect. 2 8
5 595.16 wind 3 43200 < th dose independent rect. 2 8
22 601.58 wind 1 43200 < th dose dependent rect. 24 4
32 604.27 wind 3 43200 > th dose independent rect. 3 4
37 605.14 wind 3 43200 > th dose independent rect. 6 5
38 605.21 wind 3 43200 > th dose independent rect. 21 13
40 605.50 wind 3 43200 < th dose independent rect. 21 13
46 606.31 wind 3 43200 < th dose independent rect. 3 4
58 608.74 wind 3 43200 < th dose independent rect. 6 5
61 608.86 wind 1 43200 > th dose dependent rect. 11 1
69 610.17 wind 9 43200 < th dose dependent rect. 11 1
73 610.46 wind 9 14400 > th dose dependent rect. 6 5
91 613.11 wind 5 14400 > th dose dependent rect. 5 7
102 614.61 wind 5 14400 > th dose dependent rect. 4 9
105 614.85 wind 1 43200 < th dose dependent rect. 19 11
109 615.06 radiation 1 1440 < th dose dependent rect. 18 23
111 615.25 wind 5 43200 < th dose dependent rect. 3 9
112 615.34 wind 9 14400 > th dose dependent rect. 10 1
121 616.51 wind 5 14400 > th dose dependent rect. 10 1
123 616.59 wind 3 43200 > th dose dependent rect. 5 2
126 617.05 wind 3 43200 > th dose independent sin 7 NA
131 617.43 wind 1 43200 > th dose dependent rect. 3 10
137 618.18 wind 9 43200 < th dose dependent rect. 3 10
153 619.14 wind 1 43200 < th dose dependent rect. 21 9
162 619.96 wind 1 43200 > th dose dependent rect. 5 8
163 620.01 wind 7 43200 < th dose dependent rect. 6 6
182 620.94 wind 1 43200 < th dose dependent rect. 1 2
201 622.19 wind 3 43200 < th dose independent sin 7 NA
220 623.25 wind 5 14400 > th dose dependent rect. 7 5
230 623.85 wind 5 43200 < th dose dependent rect. 8 4
264 626.22 wind 5 14400 > th dose dependent rect. 24 13
268 626.47 wind 1 43200 > th dose dependent sin 6 NA
269 626.62 wind 5 43200 < th dose dependent rect. 21 15
288 627.76 wind 9 43200 < th dose dependent sin 6 NA
289 627.81 wind 9 43200 < th dose dependent rect. 8 5
320 629.70 wind 7 43200 > th dose independent rect. 10 4
323 629.71 wind 5 43200 < th dose dependent rect. 8 2
325 629.78 wind 7 43200 < th dose independent rect. 10 4
326 629.78 wind 1 43200 > th dose dependent rect. 21 16
329 629.96 radiation 1 1440 < th dose independent rect. 18 23
336 630.38 wind 1 43200 > th dose dependent rect. 6 4
346 630.73 radiation 1 1440 > th dose independent rect. 18 23
375 631.87 wind 1 43200 > th dose dependent rect. 9 3
450 635.39 wind 7 43200 > th dose dependent rect. 10 4
467 635.88 wind 1 43200 < th dose dependent rect. 16 14
512 637.48 temperature 25 14400 > th dose independent rect. 10 2
517 637.55 wind 9 14400 > th dose independent rect. 7 4
518 637.70 wind 5 14400 > th dose independent rect. 10 1
523 637.87 wind 5 43200 < th dose dependent rect. 3 4
551 638.83 wind 1 43200 > th dose dependent rect. 3 4
555 639.03 wind 7 43200 > th dose independent rect. 12 1
561 639.12 temperature 30 14400 < th dose independent rect. 14 4
562 639.17 temperature 30 14400 < th dose independent rect. 14 1
567 639.31 temperature 25 14400 < th dose independent rect. 10 2
579 639.86 temperature 30 14400 > th dose independent rect. 14 4
585 640.16 temperature 30 14400 < th dose independent rect. 14 18
586 640.17 temperature 30 14400 < th dose independent rect. 14 15
592 640.23 temperature 30 14400 < th dose independent rect. 14 7
593 640.24 temperature 30 14400 < th dose independent rect. 14 10
603 640.40 temperature 25 14400 > th dose independent rect. 1 12
647 641.87 wind 1 43200 < th dose dependent sin 11 NA
681 642.92 radiation 1 1440 < th dose independent sin 11 NA
724 643.86 humidity 80 43200 > th dose independent rect. 2 1
797 645.65 temperature 30 14400 < th dose independent sin 14 NA
810 645.90 temperature 25 14400 < th dose independent rect. 1 12
854 646.97 temperature 30 14400 > th dose independent sin 14 NA
908 647.90 radiation 1 1440 > th dose independent sin 11 NA
911 647.95 wind 7 43200 < th dose dependent rect. 21 1
932 648.25 radiation 1 1440 < th dose independent rect. 18 13
939 648.39 wind 1 43200 < th dose dependent rect. 19 15
945 648.59 humidity 80 43200 < th dose dependent rect. 4 3
947 648.65 radiation 1 1440 > th dose independent rect. 18 13
976 649.12 temperature 25 14400 > th dose dependent rect. 13 17
978 649.15 radiation 1 1440 < th dose dependent rect. 22 19
983 649.20 radiation 1 1440 < th dose dependent rect. 20 21
987 649.31 temperature 25 14400 > th dose independent sin 5 NA