Os01g0777800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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Os01g0777800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.98 | 0.339 | 9.84 | -1.89 | 0.426 | 2.83 | 1.17 | -0.262 | -0.546 | 20.1 | 13.17 | 143 | -- | -- |
| 52.02 | 0.336 | 9.84 | -1.85 | 0.411 | 2.83 | 1.16 | -- | -0.539 | 20.2 | 12.45 | 149 | -- | -- |
| 56.02 | 0.349 | 9.84 | -1.92 | 0.391 | 2.85 | -- | -0.222 | -0.547 | 20 | 11.2 | 160 | -- | -- |
| 56.06 | 0.349 | 9.84 | -1.89 | 0.392 | 2.84 | -- | -- | -0.537 | 20 | 11.99 | 160 | -- | -- |
| 59.68 | 0.36 | 9.83 | -1.93 | -- | 3 | -- | 0.119 | -0.571 | -- | 7.372 | 274 | -- | -- |
| 133.23 | 0.541 | 9.76 | -1.29 | 1.04 | -- | 1.27 | -- | -0.15 | 17.3 | -- | -- | -- | -- |
| 136.99 | 0.548 | 9.76 | -1.29 | 1.05 | -- | -- | -- | -0.144 | 17.1 | -- | -- | -- | -- |
| 59.69 | 0.36 | 9.84 | -1.95 | -- | 3.01 | -- | -- | -0.576 | -- | 7.817 | 274 | -- | -- |
| 140.63 | 0.555 | 9.78 | -- | 0.749 | 1.95 | -- | -- | -0.232 | 18.9 | 11.99 | 160 | -- | -- |
| 194.8 | 0.652 | 9.74 | -1.33 | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
| 181.17 | 0.63 | 9.72 | -- | 1.07 | -- | -- | -- | 0.000481 | 17 | -- | -- | -- | -- |
| 152.68 | 0.575 | 9.77 | -- | -- | 2.36 | -- | -- | -0.287 | -- | 4.165 | 266 | -- | -- |
| 241.63 | 0.726 | 9.71 | -- | -- | -- | -- | -- | -0.0226 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 2 | 52.77 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 5 | 53.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 11 | 54.15 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 13 | 54.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 15 | 54.36 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 18 | 54.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 19 | 54.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 20 | 54.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 21 | 55.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 32 | 55.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 39 | 56.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 58 | 57.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 59 | 57.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 63 | 57.47 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 65 | 57.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 90 | 58.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 97 | 59.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 115 | 59.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 133 | 60.84 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 138 | 61.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 177 | 62.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 205 | 62.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 206 | 62.95 | temperature | 15 | 270 | > th | dose dependent | sin | 2 | NA |
| 221 | 63.22 | temperature | 25 | 720 | < th | dose dependent | sin | 0 | NA |
| 278 | 64.26 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 19 |
| 283 | 64.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 293 | 64.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 297 | 64.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 319 | 64.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 18 |
| 427 | 65.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 532 | 67.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 614 | 68.08 | temperature | 15 | 10 | > th | dose dependent | sin | 22 | NA |
| 636 | 68.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |