Os01g0777400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0777400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.13 | 0.249 | 13.7 | -0.689 | 0.09 | 0.659 | 0.719 | -2.19 | -0.377 | 21.6 | 21.11 | 669 | -- | -- |
| 30.28 | 0.258 | 13.7 | -0.226 | 0.36 | 0.636 | 0.477 | -- | -0.258 | 22.9 | 18.36 | 649 | -- | -- |
| 29.04 | 0.253 | 13.7 | -0.503 | 0.363 | 0.672 | -- | -1.64 | -0.332 | 22.9 | 21.11 | 669 | -- | -- |
| 31.18 | 0.262 | 13.7 | -0.243 | 0.354 | 0.624 | -- | -- | -0.256 | 22.7 | 18 | 647 | -- | -- |
| 30.08 | 0.255 | 13.7 | -0.612 | -- | 0.698 | -- | -1.67 | -0.356 | -- | 21.41 | 656 | -- | -- |
| 35.94 | 0.281 | 13.7 | -0.0963 | 0.284 | -- | 0.399 | -- | -0.153 | 20.5 | -- | -- | -- | -- |
| 36.41 | 0.283 | 13.7 | -0.108 | 0.287 | -- | -- | -- | -0.152 | 20.2 | -- | -- | -- | -- |
| 31.9 | 0.263 | 13.7 | -0.266 | -- | 0.597 | -- | -- | -0.262 | -- | 20.34 | 682 | -- | -- |
| 32.59 | 0.267 | 13.7 | -- | 0.335 | 0.554 | -- | -- | -0.215 | 22.3 | 17.03 | 188 | -- | -- |
| 40.96 | 0.299 | 13.7 | -0.11 | -- | -- | -- | -- | -0.156 | -- | -- | -- | -- | -- |
| 36.72 | 0.283 | 13.7 | -- | 0.288 | -- | -- | -- | -0.14 | 20.2 | -- | -- | -- | -- |
| 33.56 | 0.27 | 13.7 | -- | -- | 0.52 | -- | -- | -0.218 | -- | 21.33 | 671 | -- | -- |
| 41.28 | 0.3 | 13.7 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.01 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 2 | 25.03 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 5 | 25.07 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 16 | 25.21 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 28 | 25.28 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 38 | 25.37 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 39 | 25.38 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 60 | 25.54 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 98 | 25.66 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 102 | 25.69 | radiation | 10 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 110 | 25.71 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 137 | 25.76 | radiation | 40 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 184 | 25.79 | radiation | 20 | 43200 | > th | dose independent | sin | 9 | NA |
| 185 | 25.79 | radiation | 40 | 43200 | > th | dose independent | sin | 11 | NA |
| 189 | 25.79 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 211 | 25.81 | radiation | 40 | 43200 | > th | dose independent | rect. | 14 | 21 |
| 213 | 25.83 | radiation | 20 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 266 | 25.88 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 466 | 26.03 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 475 | 26.03 | radiation | 30 | 43200 | < th | dose dependent | rect. | 24 | 11 |
| 476 | 26.03 | radiation | 30 | 43200 | < th | dose dependent | rect. | 22 | 13 |
| 479 | 26.04 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 669 | 26.05 | radiation | 10 | 43200 | > th | dose dependent | sin | 8 | NA |
| 688 | 26.06 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 757 | 26.08 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 777 | 26.09 | radiation | 10 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 912 | 26.13 | radiation | 30 | 43200 | < th | dose dependent | sin | 7 | NA |
| 934 | 26.14 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |