Os01g0777200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase A1, pepsin family protein.
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Os01g0777200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase A1, pepsin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.96 | 0.49 | 9.51 | -0.683 | 1.45 | 0.357 | -0.0795 | -4.9 | 0.146 | 0.0715 | 1005 | 40 | -- | -- |
| 114.96 | 0.503 | 9.49 | -0.507 | 1.43 | -0.427 | 0.00723 | -- | 0.107 | 0.0666 | 1003 | 39 | -- | -- |
| 108.99 | 0.486 | 9.51 | -0.68 | 1.45 | 0.356 | -- | -4.9 | 0.147 | 0.0758 | 1005 | 40 | -- | -- |
| 114.96 | 0.503 | 9.49 | -0.507 | 1.43 | -0.427 | -- | -- | 0.107 | 0.0663 | 1003 | 39 | -- | -- |
| 240.94 | 0.723 | 9.47 | -0.54 | -- | -0.0736 | -- | -2.88 | 0.139 | -- | 1005 | 17 | -- | -- |
| 117.23 | 0.508 | 9.48 | -0.551 | 1.44 | -- | 0.00841 | -- | 0.128 | 0.0825 | -- | -- | -- | -- |
| 117.23 | 0.507 | 9.48 | -0.551 | 1.44 | -- | -- | -- | 0.128 | 0.0822 | -- | -- | -- | -- |
| 243.85 | 0.73 | 9.46 | -0.452 | -- | -0.532 | -- | -- | 0.12 | -- | 1003 | 34 | -- | -- |
| 121.59 | 0.514 | 9.47 | -- | 1.43 | -0.605 | -- | -- | 0.162 | 0.0505 | 1001 | 63 | -- | -- |
| 247.52 | 0.735 | 9.45 | -0.506 | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
| 125.24 | 0.524 | 9.47 | -- | 1.43 | -- | -- | -- | 0.189 | 0.0607 | -- | -- | -- | -- |
| 249.13 | 0.738 | 9.45 | -- | -- | -0.623 | -- | -- | 0.164 | -- | 1003 | 34 | -- | -- |
| 254.27 | 0.744 | 9.44 | -- | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.32 | temperature | 20.0 | 90 | > th | dose independent | rect. | 16 | 13 |
| 2 | 102.48 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 3 | 102.64 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 16 | 13 |
| 43 | 105.38 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 69 | 105.94 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 79 | 105.95 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 104 | 106.49 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 119 | 106.63 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 6 |
| 136 | 106.75 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 140 | 106.78 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 7 |
| 174 | 107.10 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 191 | 107.21 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 197 | 107.26 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 214 | 107.41 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 2 | 17 |
| 222 | 107.45 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 229 | 107.51 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 230 | 107.52 | temperature | 20.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 232 | 107.53 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 235 | 107.54 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 24 | 23 |
| 247 | 107.60 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 268 | 107.67 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 274 | 107.69 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 11 |
| 275 | 107.69 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 2 | 19 |
| 289 | 107.78 | temperature | 20.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 305 | 107.86 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 20 |
| 332 | 107.94 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 333 | 107.94 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 20 |
| 346 | 108.00 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 361 | 108.05 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 390 | 108.15 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 395 | 108.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 403 | 108.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 407 | 108.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 13 |
| 410 | 108.21 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 13 |
| 419 | 108.22 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 10 |
| 423 | 108.23 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 424 | 108.23 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 425 | 108.23 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 427 | 108.23 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 430 | 108.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 5 |
| 431 | 108.25 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 7 |
| 436 | 108.26 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 10 |
| 438 | 108.26 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 442 | 108.28 | temperature | 20.0 | 10 | > th | dose independent | sin | 13 | NA |
| 447 | 108.28 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 472 | 108.35 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 6 |
| 489 | 108.39 | atmosphere | 1005.0 | 30 | < th | dose dependent | rect. | 10 | 19 |
| 511 | 108.44 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 513 | 108.44 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 544 | 108.52 | temperature | 25.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 545 | 108.52 | wind | 7.0 | 10 | < th | dose independent | rect. | 12 | 14 |
| 549 | 108.52 | wind | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 556 | 108.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 10 |
| 557 | 108.54 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 10 |
| 563 | 108.55 | temperature | 20.0 | 270 | < th | dose independent | rect. | 13 | 19 |
| 574 | 108.57 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 14 |
| 576 | 108.57 | temperature | 30.0 | 90 | < th | dose independent | rect. | 2 | 17 |
| 608 | 108.62 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 621 | 108.65 | atmosphere | 1005.0 | 30 | < th | dose dependent | rect. | 16 | 22 |
| 629 | 108.68 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 641 | 108.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 14 |
| 645 | 108.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 648 | 108.72 | temperature | 20.0 | 90 | < th | dose independent | rect. | 21 | 12 |
| 657 | 108.74 | temperature | 20.0 | 90 | < th | dose independent | sin | 11 | NA |
| 658 | 108.74 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 3 |
| 681 | 108.75 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 734 | 108.82 | temperature | 25.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 744 | 108.84 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 10 |
| 754 | 108.85 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 18 | 13 |
| 757 | 108.86 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 13 |
| 759 | 108.86 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 16 | 6 |
| 780 | 108.90 | temperature | 20.0 | 10 | < th | dose independent | sin | 12 | NA |
| 783 | 108.90 | temperature | 30.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 794 | 108.91 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 799 | 108.91 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 809 | 108.92 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 14 |
| 842 | 108.94 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 878 | 108.99 | temperature | 25.0 | 10 | < th | dose independent | rect. | 19 | 7 |
| 906 | 109.01 | atmosphere | 1005.0 | 30 | < th | dose dependent | rect. | 24 | 22 |
| 924 | 109.04 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 6 |
| 941 | 109.05 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 9 | 3 |
| 956 | 109.06 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 23 | 19 |
| 960 | 109.07 | temperature | 30.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 965 | 109.07 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 981 | 109.09 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 10 |
| 987 | 109.09 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 994 | 109.09 | atmosphere | 1005.0 | 30 | < th | dose dependent | rect. | 20 | 23 |
| 998 | 109.10 | temperature | 20.0 | 30 | > th | dose independent | rect. | 24 | 23 |