Os01g0776700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0776700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.68 | 0.252 | 14.8 | 0.826 | 0.797 | -0.869 | 0.234 | 4.12 | -0.0803 | 21.4 | 31.99 | 1111 | -- | -- |
| 31.66 | 0.262 | 14.8 | 0.327 | 0.72 | -0.351 | -0.084 | -- | -0.048 | 21.1 | 30.39 | 1337 | -- | -- |
| 28.85 | 0.25 | 14.8 | 0.826 | 0.794 | -0.875 | -- | 4.23 | -0.0791 | 21.4 | 32.39 | 1110 | -- | -- |
| 29.41 | 0.253 | 14.8 | 0.19 | 0.795 | -0.394 | -- | -- | -0.0774 | 21.4 | 31.72 | 1114 | -- | -- |
| 65.05 | 0.376 | 14.7 | 0.832 | -- | -0.812 | -- | 4.44 | -0.0632 | -- | 33 | 1203 | -- | -- |
| 36.91 | 0.285 | 14.8 | 0.103 | 0.757 | -- | 0.156 | -- | -0.01 | 21.2 | -- | -- | -- | -- |
| 36.99 | 0.285 | 14.8 | 0.0976 | 0.756 | -- | -- | -- | -0.0101 | 21.2 | -- | -- | -- | -- |
| 61.65 | 0.366 | 14.8 | 0.134 | -- | -0.34 | -- | -- | 0.00509 | -- | 33.49 | 7250 | -- | -- |
| 30.35 | 0.257 | 14.8 | -- | 0.796 | -0.378 | -- | -- | -0.092 | 21.4 | 31.9 | 1109 | -- | -- |
| 70.11 | 0.391 | 14.8 | 0.1 | -- | -- | -- | -- | -0.014 | -- | -- | -- | -- | -- |
| 37.25 | 0.285 | 14.8 | -- | 0.756 | -- | -- | -- | -0.021 | 21.2 | -- | -- | -- | -- |
| 62.52 | 0.368 | 14.8 | -- | -- | -0.339 | -- | -- | 0.0177 | -- | 33.4 | 7278 | -- | -- |
| 70.37 | 0.392 | 14.8 | -- | -- | -- | -- | -- | -0.0251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.30 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 7 | 25.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 9 | 25.87 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 13 | 26.13 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 16 | 26.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 17 | 26.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 18 | 26.29 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 19 | 26.32 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 22 | 26.36 | radiation | 1.0 | 30 | < th | dose dependent | sin | 12 | NA |
| 25 | 26.38 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 37 | 26.50 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 42 | 26.56 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 44 | 26.57 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 45 | 26.57 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 9 |
| 48 | 26.59 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 54 | 26.61 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 56 | 26.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 59 | 26.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 62 | 26.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 63 | 26.62 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 66 | 26.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 74 | 26.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 77 | 26.65 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 10 |
| 88 | 26.72 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 89 | 26.72 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 95 | 26.74 | radiation | 1.0 | 30 | < th | dose independent | sin | 12 | NA |
| 99 | 26.75 | radiation | 1.0 | 30 | > th | dose independent | sin | 12 | NA |
| 135 | 26.89 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 138 | 26.90 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 142 | 26.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 143 | 26.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 155 | 27.01 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 183 | 27.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 184 | 27.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 18 |
| 186 | 27.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 187 | 27.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 189 | 27.11 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 203 | 27.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 18 |
| 205 | 27.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 216 | 27.22 | wind | 5.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 221 | 27.23 | humidity | 90.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 230 | 27.26 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 245 | 27.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 246 | 27.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 247 | 27.33 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 248 | 27.33 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 257 | 27.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 258 | 27.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 259 | 27.35 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 261 | 27.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 270 | 27.38 | wind | 9.0 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 280 | 27.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 283 | 27.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 284 | 27.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 309 | 27.53 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 317 | 27.55 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 321 | 27.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 346 | 27.59 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 15 | 12 |
| 347 | 27.60 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 361 | 27.62 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 380 | 27.67 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 396 | 27.72 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 410 | 27.76 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 412 | 27.76 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 418 | 27.77 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 434 | 27.79 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 438 | 27.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 441 | 27.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 442 | 27.80 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 449 | 27.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 463 | 27.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 6 |
| 466 | 27.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 470 | 27.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 473 | 27.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 476 | 27.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 477 | 27.82 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 485 | 27.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 486 | 27.82 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 511 | 27.86 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 521 | 27.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 522 | 27.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 527 | 27.89 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 529 | 27.89 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 535 | 27.90 | radiation | 1.0 | 30 | > th | dose independent | rect. | 16 | 15 |
| 536 | 27.90 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 537 | 27.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 538 | 27.90 | wind | 9.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 554 | 27.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 563 | 27.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 573 | 27.93 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 13 |
| 583 | 27.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 621 | 27.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 8 |
| 628 | 27.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 665 | 28.01 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 679 | 28.03 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 683 | 28.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 709 | 28.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 744 | 28.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 8 |
| 753 | 28.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 8 |
| 768 | 28.10 | humidity | 80.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 812 | 28.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 917 | 28.24 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 6 |
| 925 | 28.24 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 930 | 28.24 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 946 | 28.27 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 947 | 28.27 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 948 | 28.27 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 951 | 28.27 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 952 | 28.27 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 961 | 28.27 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 983 | 28.28 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 18 |