Os01g0776600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Purple acid phosphatase (EC 3.1.3.2).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0776600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Purple acid phosphatase (EC 3.1.3.2).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.11 | 0.517 | 12 | -0.569 | 1.39 | -1.6 | -1.91 | 6.09 | -0.147 | 16.4 | 26.3 | 4716 | -- | -- |
| 124.1 | 0.519 | 12.1 | -0.747 | 1.23 | -1.88 | -1.54 | -- | -0.0661 | 16.2 | 21.1 | 24298 | -- | -- |
| 129.95 | 0.531 | 12 | -0.581 | 1.4 | -1.63 | -- | 6.27 | -0.196 | 16.7 | 26.4 | 4680 | -- | -- |
| 131.33 | 0.534 | 12.1 | -0.885 | 1.3 | -1.87 | -- | -- | -0.0928 | 16.7 | 21.3 | 22745 | -- | -- |
| 221.15 | 0.693 | 12 | -0.56 | -- | -1.75 | -- | 6.35 | -0.129 | -- | 25.6 | 4172 | -- | -- |
| 183.83 | 0.636 | 12.3 | -2.69 | 1.34 | -- | -1.87 | -- | -0.803 | 16.2 | -- | -- | -- | -- |
| 192.62 | 0.65 | 12.3 | -2.71 | 1.35 | -- | -- | -- | -0.813 | 16.6 | -- | -- | -- | -- |
| 221.51 | 0.693 | 12.1 | -0.783 | -- | -1.99 | -- | -- | -0.0591 | -- | 21.18 | 22758 | -- | -- |
| 131.1 | 0.533 | 12 | -- | 1.22 | -2.5 | -- | -- | 0.102 | 16.6 | 19.34 | 28569 | -- | -- |
| 289.05 | 0.794 | 12.3 | -2.76 | -- | -- | -- | -- | -0.849 | -- | -- | -- | -- | -- |
| 385.87 | 0.919 | 12.2 | -- | 1.4 | -- | -- | -- | -0.512 | 16.5 | -- | -- | -- | -- |
| 221.84 | 0.694 | 12 | -- | -- | -2.56 | -- | -- | 0.124 | -- | 19.3 | 28520 | -- | -- |
| 489.92 | 1.03 | 12.2 | -- | -- | -- | -- | -- | -0.542 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.27 | radiation | 30 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 3 | 111.34 | radiation | 30 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 5 | 111.35 | radiation | 30 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 14 | 111.68 | radiation | 30 | 43200 | < th | dose independent | rect. | 16 | 7 |
| 34 | 112.19 | radiation | 30 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 35 | 112.28 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 37 | 112.59 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 69 | 112.79 | radiation | 10 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 74 | 112.91 | radiation | 10 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 81 | 112.92 | radiation | 10 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 87 | 112.95 | radiation | 40 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 89 | 113.02 | radiation | 40 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 91 | 113.07 | radiation | 40 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 114 | 113.36 | radiation | 10 | 43200 | < th | dose independent | sin | 13 | NA |
| 115 | 113.36 | radiation | 40 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 116 | 113.37 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 118 | 113.39 | radiation | 40 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 133 | 113.58 | radiation | 30 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 186 | 113.95 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 216 | 114.08 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 217 | 114.08 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 219 | 114.13 | radiation | 40 | 43200 | < th | dose independent | sin | 13 | NA |
| 244 | 114.31 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 20 |
| 251 | 114.43 | radiation | 10 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 252 | 114.43 | radiation | 10 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 258 | 114.44 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 268 | 114.50 | radiation | 1 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 274 | 114.64 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 309 | 114.84 | radiation | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 332 | 114.92 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 378 | 115.02 | radiation | 40 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 403 | 115.27 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 404 | 115.29 | radiation | 40 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 406 | 115.30 | radiation | 20 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 428 | 115.37 | radiation | 10 | 43200 | < th | dose dependent | rect. | 19 | 12 |
| 429 | 115.38 | radiation | 10 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 435 | 115.40 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 442 | 115.42 | temperature | 15 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 484 | 115.60 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 503 | 115.66 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 506 | 115.70 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 514 | 115.75 | radiation | 40 | 43200 | > th | dose dependent | sin | 13 | NA |
| 521 | 115.80 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 575 | 116.01 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 602 | 116.04 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 618 | 116.11 | temperature | 15 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 626 | 116.12 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 686 | 116.36 | radiation | 1 | 43200 | > th | dose dependent | sin | 13 | NA |
| 739 | 116.60 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 740 | 116.60 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 783 | 116.81 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 798 | 116.92 | temperature | 15 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 919 | 117.26 | radiation | 40 | 43200 | < th | dose dependent | sin | 13 | NA |
| 950 | 117.32 | radiation | 10 | 43200 | < th | dose independent | no | NA | NA |
| 951 | 117.32 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 15 |