Os01g0776300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0776300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.25 | 0.349 | 10.3 | 0.812 | 0.426 | -2.08 | 0.444 | 2.27 | -0.141 | 22.7 | 14.8 | 1177 | -- | -- |
| 62.82 | 0.369 | 10.3 | 0.543 | 0.419 | -1.9 | 0.733 | -- | -0.124 | 22.9 | 15.9 | 1221 | -- | -- |
| 55.87 | 0.348 | 10.3 | 0.806 | 0.467 | -2.08 | -- | 2.41 | -0.144 | 22.5 | 14.9 | 1123 | -- | -- |
| 62.61 | 0.369 | 10.3 | 0.391 | 0.44 | -1.84 | -- | -- | -0.261 | 21.7 | 13.4 | 2353 | -- | -- |
| 62.16 | 0.367 | 10.2 | 0.824 | -- | -1.97 | -- | 2.28 | -0.14 | -- | 7.025 | 1425 | -- | -- |
| 127.95 | 0.53 | 10.4 | -0.291 | 0.257 | -- | 0.388 | -- | -0.633 | 21.1 | -- | -- | -- | -- |
| 128.26 | 0.53 | 10.4 | -0.302 | 0.269 | -- | -- | -- | -0.632 | 20.2 | -- | -- | -- | -- |
| 69.01 | 0.387 | 10.3 | 0.67 | -- | -1.96 | -- | -- | -0.102 | -- | 0.09582 | 7356 | -- | -- |
| 63.57 | 0.371 | 10.3 | -- | 0.574 | -1.96 | -- | -- | -0.325 | 21.9 | 14.81 | 997 | -- | -- |
| 132.24 | 0.537 | 10.4 | -0.304 | -- | -- | -- | -- | -0.635 | -- | -- | -- | -- | -- |
| 130.66 | 0.535 | 10.4 | -- | 0.271 | -- | -- | -- | -0.598 | 20.1 | -- | -- | -- | -- |
| 68.94 | 0.387 | 10.3 | -- | -- | -1.82 | -- | -- | -0.328 | -- | 12.84 | 1453 | -- | -- |
| 134.69 | 0.542 | 10.4 | -- | -- | -- | -- | -- | -0.601 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 18 |
| 7 | 49.93 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 65 | 53.26 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 69 | 53.38 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 74 | 53.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 85 | 53.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 116 | 53.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 7 |
| 165 | 54.13 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 174 | 54.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 236 | 54.35 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 891 | 56.61 | temperature | 15 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 893 | 56.62 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 902 | 56.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 928 | 56.71 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 936 | 56.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 960 | 56.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 23 |