Os01g0775500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Jacalin-related lectin domain containing protein.
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Os01g0775500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Jacalin-related lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 218.97 | 0.695 | 8.47 | -0.284 | 2.5 | -1.31 | -0.509 | -1.34 | -0.34 | 8.44 | 21.34 | 1072 | -- | -- |
| 223.33 | 0.696 | 8.43 | 0.0483 | 2.5 | -1.21 | -0.254 | -- | -0.267 | 8.43 | 21.38 | 1057 | -- | -- |
| 219.76 | 0.69 | 8.47 | -0.26 | 2.5 | -1.31 | -- | -1.22 | -0.332 | 8.43 | 21.35 | 1072 | -- | -- |
| 223.55 | 0.696 | 8.43 | 0.0409 | 2.5 | -1.21 | -- | -- | -0.267 | 8.43 | 21.38 | 1056 | -- | -- |
| 533.16 | 1.08 | 8.49 | -0.137 | -- | -1.71 | -- | -1.16 | -0.151 | -- | 21.65 | 740 | -- | -- |
| 269.78 | 0.77 | 8.5 | -0.426 | 2.61 | -- | -0.292 | -- | -0.604 | 8.62 | -- | -- | -- | -- |
| 270.06 | 0.77 | 8.5 | -0.436 | 2.61 | -- | -- | -- | -0.604 | 8.62 | -- | -- | -- | -- |
| 536.13 | 1.08 | 8.46 | 0.212 | -- | -1.78 | -- | -- | -0.094 | -- | 21.4 | 726 | -- | -- |
| 223.59 | 0.696 | 8.43 | -- | 2.5 | -1.2 | -- | -- | -0.274 | 8.44 | 21.39 | 1056 | -- | -- |
| 653.24 | 1.19 | 8.57 | -0.428 | -- | -- | -- | -- | -0.581 | -- | -- | -- | -- | -- |
| 275.07 | 0.776 | 8.49 | -- | 2.61 | -- | -- | -- | -0.556 | 8.63 | -- | -- | -- | -- |
| 537.2 | 1.08 | 8.47 | -- | -- | -1.73 | -- | -- | -0.129 | -- | 21.39 | 724 | -- | -- |
| 658.07 | 1.2 | 8.56 | -- | -- | -- | -- | -- | -0.534 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 215.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 18 |
| 2 | 215.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 20 |
| 3 | 215.75 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 4 | 215.83 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 6 | 216.34 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 8 | 216.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 9 | 216.47 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 24 | 217.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 28 | 217.73 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 29 | 217.86 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 53 | 218.86 | wind | 1 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 56 | 218.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 104 | 220.24 | wind | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 118 | 220.45 | temperature | 10 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 139 | 220.77 | wind | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 147 | 220.87 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 158 | 221.10 | wind | 3 | 14400 | < th | dose dependent | sin | 11 | NA |
| 161 | 221.11 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 12 |
| 167 | 221.22 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 195 | 221.64 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 228 | 222.19 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 259 | 222.60 | wind | 1 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 260 | 222.60 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 20 |
| 291 | 222.89 | wind | 1 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 333 | 223.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 15 |
| 363 | 223.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 436 | 224.07 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 487 | 224.44 | wind | 1 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 498 | 224.51 | temperature | 25 | 720 | < th | dose dependent | sin | 7 | NA |
| 507 | 224.55 | wind | 1 | 14400 | < th | dose independent | rect. | 12 | 19 |
| 522 | 224.65 | wind | 3 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 539 | 224.76 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 21 |
| 556 | 224.87 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 22 |
| 629 | 225.31 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 637 | 225.35 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 22 |
| 695 | 225.62 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 751 | 225.95 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 4 |
| 842 | 226.42 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 11 |
| 846 | 226.44 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 858 | 226.48 | wind | 1 | 14400 | < th | dose dependent | rect. | 3 | 9 |
| 899 | 226.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 914 | 226.76 | wind | 1 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 941 | 226.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 971 | 226.99 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 982 | 227.02 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 20 |