Os01g0774100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0774100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.52 | 0.331 | 10.9 | 0.678 | 0.483 | -2.01 | 0.582 | 2.04 | -0.0861 | 22.7 | 14.64 | 1177 | -- | -- |
| 53.17 | 0.34 | 11 | 0.261 | 0.626 | -2.05 | 0.828 | -- | -0.202 | 22.5 | 14.6 | 1057 | -- | -- |
| 50.62 | 0.331 | 10.9 | 0.662 | 0.53 | -1.99 | -- | 2.21 | -0.0962 | 22.4 | 14.8 | 1114 | -- | -- |
| 55.34 | 0.346 | 11 | 0.215 | 0.533 | -1.98 | -- | -- | -0.21 | 22.4 | 14.6 | 1119 | -- | -- |
| 59.49 | 0.359 | 10.9 | 0.689 | -- | -1.88 | -- | 2.09 | -0.0846 | -- | 13.14 | 1440 | -- | -- |
| 116.46 | 0.506 | 11.1 | -0.354 | 0.311 | -- | 0.541 | -- | -0.552 | 21.6 | -- | -- | -- | -- |
| 117.18 | 0.507 | 11.1 | -0.371 | 0.327 | -- | -- | -- | -0.55 | 20.6 | -- | -- | -- | -- |
| 63.17 | 0.37 | 11 | 0.227 | -- | -1.87 | -- | -- | -0.206 | -- | 13.41 | 1471 | -- | -- |
| 56.39 | 0.35 | 11 | -- | 0.518 | -1.9 | -- | -- | -0.243 | 22.4 | 13.95 | 1125 | -- | -- |
| 123.19 | 0.519 | 11.1 | -0.372 | -- | -- | -- | -- | -0.553 | -- | -- | -- | -- | -- |
| 120.81 | 0.514 | 11.1 | -- | 0.328 | -- | -- | -- | -0.509 | 20.5 | -- | -- | -- | -- |
| 64.35 | 0.374 | 11 | -- | -- | -1.77 | -- | -- | -0.246 | -- | 10.87 | 1460 | -- | -- |
| 126.84 | 0.526 | 11.1 | -- | -- | -- | -- | -- | -0.512 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.54 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 3 | 47.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 19 |
| 11 | 47.76 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 16 | 47.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 107 | 48.82 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 116 | 48.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 15 |
| 190 | 49.08 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 693 | 51.04 | temperature | 15 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 700 | 51.07 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 702 | 51.08 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 815 | 51.34 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 816 | 51.34 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 826 | 51.38 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 833 | 51.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 861 | 51.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 903 | 51.54 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 915 | 51.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 926 | 51.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |