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Os01g0773200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.66 (0.0265) R2 : 0.00819
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.108 (0.0557) R2dN8 : 0.0106 R2N8 : 0.00819
σ : 0.499
deviance : 114.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.36 0.447 6.76 -0.855 0.47 0.438 -0.0398 -1.21 -0.134 15 20.1 3676 -- --
91.99 0.447 6.71 -0.676 0.474 0.711 0.00792 -- -0.0866 14.9 19.6 3699 -- --
90.36 0.443 6.76 -0.855 0.47 0.438 -- -1.21 -0.134 15 20.11 3676 -- --
91.34 0.445 6.71 -0.716 0.465 0.882 -- -- -0.085 14.9 18.3 3573 -- --
102.65 0.472 6.76 -0.828 -- 0.389 -- -1.2 -0.128 -- 20.2 3386 -- --
100.1 0.469 6.67 -0.282 0.451 -- 0.0481 -- 0.0864 15.1 -- -- -- --
100.11 0.469 6.67 -0.281 0.451 -- -- -- 0.0867 15.1 -- -- -- --
103.72 0.474 6.71 -0.697 -- 0.833 -- -- -0.0808 -- 18.3 3348 -- --
99.08 0.464 6.67 -- 0.44 0.531 -- -- 0.0905 15 17.3 3405 -- --
111.72 0.494 6.67 -0.3 -- -- -- -- 0.0749 -- -- -- -- --
102.19 0.473 6.66 -- 0.457 -- -- -- 0.118 15.1 -- -- -- --
111.47 0.492 6.67 -- -- 0.491 -- -- 0.0718 -- 17.3 3284 -- --
114.09 0.499 6.66 -- -- -- -- -- 0.108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 87.77 atmosphere 995.0 43200 > th dose independent rect. 18 18
2 87.79 atmosphere 995.0 43200 < th dose independent rect. 18 18
8 88.14 atmosphere 995.0 43200 > th dose independent sin 7 NA
11 88.16 atmosphere 995.0 43200 > th dose independent rect. 21 16
13 88.23 atmosphere 995.0 43200 < th dose independent sin 7 NA
14 88.27 atmosphere 995.0 43200 < th dose dependent rect. 16 17
16 88.33 atmosphere 995.0 43200 < th dose independent rect. 21 15
24 88.35 atmosphere 995.0 43200 < th dose dependent rect. 11 19
36 88.47 atmosphere 995.0 43200 < th dose dependent sin 10 NA
73 88.79 atmosphere 995.0 43200 < th dose dependent rect. 21 12
95 89.04 atmosphere 995.0 43200 > th dose independent rect. 3 6
96 89.05 atmosphere 995.0 43200 < th dose dependent sin 16 NA
97 89.06 atmosphere 995.0 43200 < th dose independent rect. 1 9
100 89.07 atmosphere 995.0 43200 > th dose independent rect. 1 9
102 89.08 atmosphere 995.0 43200 < th dose independent rect. 3 6
106 89.10 atmosphere 995.0 43200 > th dose independent rect. 5 3
127 89.21 temperature 15.0 90 > th dose dependent rect. 5 22
135 89.29 atmosphere 995.0 43200 < th dose independent rect. 4 4
137 89.29 atmosphere 995.0 43200 < th dose dependent rect. 4 4
200 89.93 wind 1.0 14400 < th dose dependent rect. 23 3
213 90.01 temperature 20.0 720 > th dose independent rect. 23 17
230 90.12 temperature 25.0 720 < th dose dependent rect. 4 10
234 90.13 temperature 25.0 270 < th dose dependent rect. 9 6
250 90.23 wind 1.0 14400 < th dose independent rect. 23 3
261 90.26 temperature 20.0 1440 < th dose dependent rect. 4 1
272 90.29 wind 3.0 43200 > th dose dependent rect. 23 1
281 90.34 temperature 20.0 1440 < th dose independent rect. 6 1
283 90.35 temperature 20.0 1440 > th dose independent rect. 6 1
284 90.35 wind 7.0 43200 > th dose independent rect. 21 2
289 90.36 atmosphere 995.0 43200 < th dose dependent no NA NA
292 90.36 temperature 20.0 30 > th dose dependent rect. 5 17
293 90.36 atmosphere 995.0 43200 < th dose dependent rect. 21 21
301 90.37 temperature 30.0 10 < th dose dependent rect. 8 11
303 90.38 temperature 25.0 270 < th dose dependent rect. 8 9
327 90.43 wind 7.0 43200 < th dose independent rect. 21 2
336 90.46 temperature 25.0 90 < th dose independent rect. 9 9
341 90.47 temperature 25.0 720 < th dose dependent sin 3 NA
376 90.53 atmosphere 995.0 43200 < th dose dependent rect. 1 23
378 90.54 temperature 25.0 1440 < th dose dependent rect. 8 1
383 90.56 temperature 30.0 30 < th dose dependent sin 0 NA
387 90.57 temperature 25.0 270 < th dose independent rect. 22 19
394 90.59 temperature 20.0 1440 > th dose independent rect. 5 3
395 90.59 temperature 25.0 270 < th dose independent rect. 22 17
408 90.61 temperature 20.0 1440 < th dose independent rect. 5 3
409 90.61 temperature 25.0 720 < th dose dependent rect. 7 4
430 90.65 temperature 20.0 4320 > th dose independent rect. 19 3
443 90.67 temperature 20.0 4320 > th dose independent rect. 18 6
444 90.67 radiation 20.0 4320 > th dose dependent rect. 16 16
446 90.68 temperature 25.0 270 < th dose independent sin 3 NA
449 90.69 precipitation 0.1 43200 > th dose independent rect. 10 2
452 90.69 precipitation 0.1 43200 > th dose dependent rect. 10 2
454 90.69 humidity 90.0 14400 > th dose dependent rect. 3 13
461 90.70 temperature 20.0 30 > th dose dependent rect. 9 22
467 90.71 temperature 30.0 1440 < th dose dependent rect. 5 1
487 90.74 temperature 20.0 4320 > th dose independent rect. 20 1
500 90.75 humidity 90.0 14400 > th dose dependent rect. 4 11
509 90.76 wind 3.0 43200 < th dose dependent rect. 8 1
524 90.78 humidity 90.0 14400 > th dose dependent sin 3 NA
530 90.79 temperature 15.0 1440 > th dose dependent rect. 5 1
534 90.79 temperature 30.0 30 < th dose dependent rect. 7 23
535 90.80 wind 5.0 43200 < th dose independent rect. 18 11
543 90.81 temperature 20.0 4320 < th dose independent rect. 18 6
548 90.81 temperature 10.0 720 > th dose dependent rect. 4 7
560 90.83 temperature 20.0 4320 < th dose independent rect. 19 4
571 90.84 temperature 20.0 720 < th dose independent rect. 1 16
580 90.85 wind 5.0 43200 > th dose independent rect. 18 11
593 90.87 temperature 20.0 720 > th dose independent sin 4 NA
595 90.87 temperature 20.0 1440 < th dose independent rect. 3 6
605 90.88 wind 1.0 14400 > th dose independent rect. 24 2
633 90.90 humidity 90.0 43200 > th dose dependent rect. 12 1
657 90.93 precipitation 0.1 43200 < th dose independent rect. 10 2
659 90.93 precipitation 0.1 43200 < th dose dependent rect. 10 2
671 90.94 radiation 1.0 14400 > th dose independent rect. 18 11
681 90.95 humidity 90.0 14400 > th dose dependent rect. 23 20
688 90.96 temperature 25.0 720 < th dose dependent rect. 23 17
718 91.00 temperature 15.0 720 > th dose dependent rect. 23 13
729 91.02 temperature 25.0 270 < th dose independent rect. 9 6
748 91.03 wind 1.0 1440 < th dose dependent rect. 11 1
820 91.08 temperature 20.0 4320 > th dose independent rect. 17 17
852 91.10 wind 1.0 1440 < th dose independent rect. 11 1
874 91.12 temperature 20.0 4320 > th dose independent sin 14 NA
879 91.12 temperature 20.0 1440 < th dose independent rect. 22 13
886 91.12 temperature 20.0 90 > th dose dependent rect. 5 13
891 91.13 temperature 20.0 4320 < th dose independent rect. 17 17
900 91.13 temperature 30.0 90 < th dose dependent rect. 21 22
922 91.15 humidity 80.0 14400 < th dose independent rect. 11 1
928 91.15 temperature 20.0 1440 > th dose independent rect. 22 13