Os01g0773100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0773100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.21 | 0.373 | 7.4 | 1.12 | 0.446 | 3.29 | -0.503 | 15.7 | 0.373 | 22.1 | 80 | 30 | 22 | 2 |
| 64.85 | 0.378 | 7.4 | 1.08 | 0.441 | 6.82 | -0.449 | -- | 0.377 | 22.1 | 80 | 30 | 22 | 2 |
| 65.15 | 0.376 | 7.4 | 1.14 | 0.452 | 3.28 | -- | 15.5 | 0.376 | 21.8 | 79.77 | 29 | 22.2 | 2.58 |
| 65.36 | 0.377 | 7.4 | 1.14 | 0.446 | 6.75 | -- | -- | 0.371 | 21.9 | 78.97 | 31 | 22 | 1.93 |
| 77.3 | 0.409 | 7.38 | 1.14 | -- | 3.49 | -- | 15.5 | 0.377 | -- | 79.23 | 26 | 22.6 | 2.67 |
| 110.82 | 0.494 | 7.4 | 1.14 | 0.494 | -- | -0.266 | -- | 0.364 | 22.1 | -- | -- | -- | -- |
| 111.09 | 0.494 | 7.4 | 1.15 | 0.496 | -- | -- | -- | 0.365 | 22 | -- | -- | -- | -- |
| 76.7 | 0.408 | 7.39 | 1.11 | -- | 6.97 | -- | -- | 0.384 | -- | 78.78 | 31 | 22 | 2.38 |
| 97.57 | 0.46 | 7.43 | -- | 0.45 | 6.99 | -- | -- | 0.256 | 22 | 78.49 | 30 | 22.4 | 1.25 |
| 125.94 | 0.524 | 7.39 | 1.16 | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
| 146.08 | 0.565 | 7.43 | -- | 0.501 | -- | -- | -- | 0.236 | 22.2 | -- | -- | -- | -- |
| 109.69 | 0.489 | 7.42 | -- | -- | 7.2 | -- | -- | 0.257 | -- | 78.3 | 30 | 22.3 | 2.64 |
| 161.33 | 0.593 | 7.42 | -- | -- | -- | -- | -- | 0.237 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.21 | humidity | 80 | 30 | < th | dose independent | rect. | 22 | 2 |
| 4 | 64.25 | humidity | 80 | 30 | < th | dose dependent | rect. | 22 | 2 |
| 72 | 86.84 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 5 |
| 140 | 94.05 | temperature | 20 | 270 | < th | dose independent | rect. | 19 | 4 |
| 143 | 94.48 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 9 |
| 153 | 94.87 | temperature | 20 | 270 | < th | dose independent | rect. | 9 | 14 |
| 154 | 94.89 | wind | 7 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 198 | 96.07 | wind | 7 | 270 | > th | dose independent | rect. | 20 | 1 |
| 200 | 96.09 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 202 | 96.18 | temperature | 20 | 270 | < th | dose dependent | rect. | 9 | 14 |
| 215 | 96.51 | temperature | 20 | 270 | < th | dose dependent | rect. | 19 | 4 |
| 275 | 97.90 | temperature | 25 | 270 | < th | dose independent | rect. | 16 | 14 |
| 277 | 97.99 | temperature | 20 | 270 | < th | dose independent | sin | 20 | NA |
| 291 | 98.33 | wind | 5 | 270 | < th | dose independent | rect. | 17 | 9 |
| 307 | 98.75 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 351 | 99.17 | temperature | 20 | 270 | > th | dose independent | rect. | 7 | 18 |
| 359 | 99.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 15 |
| 375 | 99.37 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 7 |
| 377 | 99.41 | wind | 5 | 90 | > th | dose independent | rect. | 22 | 1 |
| 402 | 99.59 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 16 |
| 436 | 99.86 | wind | 5 | 270 | > th | dose independent | rect. | 20 | 3 |
| 441 | 99.91 | humidity | 80 | 90 | > th | dose independent | rect. | 20 | 8 |
| 442 | 99.94 | humidity | 80 | 270 | > th | dose independent | rect. | 20 | 6 |
| 455 | 100.06 | temperature | 20 | 270 | < th | dose dependent | sin | 20 | NA |
| 511 | 100.43 | wind | 5 | 270 | > th | dose dependent | rect. | 19 | 4 |
| 533 | 100.60 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 536 | 100.62 | temperature | 25 | 270 | < th | dose independent | rect. | 21 | 9 |
| 604 | 101.00 | wind | 9 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 705 | 101.48 | humidity | 90 | 270 | > th | dose dependent | rect. | 22 | 7 |
| 779 | 101.74 | temperature | 20 | 270 | > th | dose independent | sin | 17 | NA |
| 783 | 101.75 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 14 | 17 |
| 790 | 101.78 | humidity | 90 | 270 | > th | dose independent | rect. | 23 | 7 |
| 801 | 101.83 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 2 | 4 |
| 808 | 101.87 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 14 | 19 |
| 826 | 101.95 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 5 |
| 841 | 101.99 | temperature | 25 | 270 | < th | dose independent | sin | 12 | NA |
| 843 | 102.00 | humidity | 90 | 270 | > th | dose dependent | rect. | 17 | 12 |
| 850 | 102.02 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 18 |
| 870 | 102.06 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 3 |
| 930 | 102.19 | wind | 5 | 270 | < th | dose independent | sin | 13 | NA |
| 934 | 102.21 | radiation | 10 | 270 | < th | dose independent | rect. | 2 | 4 |
| 935 | 102.21 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 1 | 6 |
| 946 | 102.22 | temperature | 10 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 963 | 102.26 | humidity | 70 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 982 | 102.33 | humidity | 90 | 270 | > th | dose independent | rect. | 1 | 4 |
| 989 | 102.35 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |