Os01g0772500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 14 protein.
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Os01g0772500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 14 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 373.41 | 0.908 | 3.44 | -0.397 | 0.333 | -0.735 | 0.155 | -0.593 | -0.142 | 11.6 | 20.11 | 34 | -- | -- |
| 375 | 0.902 | 3.43 | -0.291 | 0.316 | -0.697 | -0.0836 | -- | -0.129 | 11.6 | 20.2 | 35 | -- | -- |
| 373.5 | 0.9 | 3.43 | -0.383 | 0.332 | -0.732 | -- | -0.541 | -0.139 | 11.6 | 20.14 | 35 | -- | -- |
| 375 | 0.902 | 3.43 | -0.295 | 0.327 | -0.695 | -- | -- | -0.125 | 11.4 | 20.19 | 35 | -- | -- |
| 379.93 | 0.908 | 3.44 | -0.4 | -- | -0.639 | -- | -0.493 | -0.16 | -- | 20.1 | 30 | -- | -- |
| 394.62 | 0.931 | 3.45 | -0.472 | 0.193 | -- | -0.0584 | -- | -0.248 | 10 | -- | -- | -- | -- |
| 394.63 | 0.93 | 3.45 | -0.474 | 0.193 | -- | -- | -- | -0.248 | 9.96 | -- | -- | -- | -- |
| 381.18 | 0.909 | 3.43 | -0.323 | -- | -0.601 | -- | -- | -0.14 | -- | 20.14 | 35 | -- | -- |
| 377.1 | 0.904 | 3.42 | -- | 0.337 | -0.754 | -- | -- | -0.0863 | 11.6 | 20.2 | 35 | -- | -- |
| 396.88 | 0.931 | 3.46 | -0.477 | -- | -- | -- | -- | -0.248 | -- | -- | -- | -- | -- |
| 400.56 | 0.936 | 3.44 | -- | 0.195 | -- | -- | -- | -0.195 | 10.1 | -- | -- | -- | -- |
| 383.82 | 0.912 | 3.42 | -- | -- | -0.648 | -- | -- | -0.0969 | -- | 20.15 | 33 | -- | -- |
| 402.87 | 0.937 | 3.45 | -- | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 364.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 7 | 367.03 | temperature | 20 | 720 | < th | dose independent | rect. | 15 | 4 |
| 11 | 367.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 23 | 367.76 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 1 |
| 28 | 367.83 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 23 |
| 42 | 368.16 | wind | 5 | 1440 | > th | dose independent | rect. | 18 | 14 |
| 44 | 368.21 | temperature | 20 | 30 | > th | dose independent | rect. | 10 | 23 |
| 45 | 368.25 | wind | 5 | 1440 | > th | dose independent | rect. | 18 | 9 |
| 46 | 368.28 | wind | 5 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 48 | 368.30 | wind | 5 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 52 | 368.33 | wind | 5 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 54 | 368.36 | wind | 5 | 1440 | < th | dose independent | rect. | 18 | 12 |
| 59 | 368.44 | temperature | 20 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 64 | 368.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 70 | 368.68 | wind | 5 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 74 | 368.71 | wind | 5 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 79 | 368.79 | wind | 5 | 1440 | > th | dose independent | rect. | 18 | 7 |
| 92 | 369.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 10 |
| 128 | 369.67 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 139 | 369.79 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 15 |
| 187 | 370.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 202 | 370.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 12 |
| 221 | 370.67 | wind | 5 | 1440 | > th | dose independent | sin | 10 | NA |
| 234 | 370.81 | wind | 5 | 1440 | < th | dose independent | sin | 10 | NA |
| 240 | 370.83 | wind | 5 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 257 | 371.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 283 | 371.23 | wind | 5 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 287 | 371.25 | wind | 5 | 270 | > th | dose independent | rect. | 18 | 9 |
| 354 | 371.56 | wind | 5 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 379 | 371.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 16 |
| 381 | 371.68 | wind | 7 | 720 | > th | dose independent | rect. | 19 | 3 |
| 395 | 371.77 | wind | 5 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 403 | 371.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 417 | 371.87 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 4 |
| 420 | 371.87 | temperature | 15 | 720 | > th | dose dependent | sin | 17 | NA |
| 488 | 372.13 | wind | 3 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 497 | 372.17 | wind | 5 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 504 | 372.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 3 |
| 512 | 372.24 | wind | 5 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 535 | 372.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 16 |
| 538 | 372.34 | wind | 3 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 562 | 372.44 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 11 |
| 616 | 372.61 | temperature | 20 | 10 | < th | dose independent | rect. | 13 | 17 |
| 618 | 372.61 | wind | 7 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 694 | 372.84 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 14 |
| 747 | 372.98 | wind | 3 | 1440 | > th | dose dependent | sin | 10 | NA |
| 765 | 373.04 | temperature | 20 | 30 | > th | dose independent | sin | 11 | NA |
| 775 | 373.08 | temperature | 20 | 1440 | > th | dose independent | sin | 23 | NA |
| 814 | 373.18 | temperature | 20 | 10 | < th | dose independent | rect. | 9 | 21 |
| 904 | 373.40 | wind | 5 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 909 | 373.41 | wind | 7 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 927 | 373.47 | temperature | 20 | 30 | > th | dose independent | no | NA | NA |
| 984 | 373.61 | temperature | 20 | 30 | > th | dose independent | rect. | 21 | 12 |