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Os01g0772000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0138) R2 : 0.000743
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.017 (0.0291) R2dN8 : 0.000959 R2N8 : 0.000743
σ : 0.261
deviance : 31.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
9.41 0.144 10.1 0.571 0.362 -0.171 -0.207 0.0163 0.0584 22 21.71 126 -- --
9.38 0.143 10.1 0.565 0.363 -0.183 -0.229 -- 0.0529 21.8 21.01 153 -- --
9.53 0.144 10.1 0.57 0.376 -0.18 -- 0.0733 0.0594 22 21.21 153 -- --
9.55 0.144 10.1 0.579 0.368 -0.175 -- -- 0.0561 22 21.71 159 -- --
13.69 0.172 10.1 0.579 -- -0.289 -- 0.22 0.0613 -- 4.88 99 -- --
10.2 0.15 10.1 0.557 0.444 -- -0.163 -- 0.0434 22.7 -- -- -- --
10.31 0.15 10.1 0.563 0.444 -- -- -- 0.0438 22.8 -- -- -- --
13.04 0.169 10.1 0.575 -- -0.29 -- -- 0.0564 -- 1.53 44 -- --
17.89 0.197 10.1 -- 0.412 -0.185 -- -- 0.000712 22.6 39.97 109 -- --
22.52 0.222 10.1 0.572 -- -- -- -- 0.0465 -- -- -- -- --
18.67 0.202 10.1 -- 0.449 -- -- -- -0.0189 22.9 -- -- -- --
21.42 0.216 10.1 -- -- -0.318 -- -- -0.00458 -- 8.29 66 -- --
31.15 0.261 10.1 -- -- -- -- -- -0.017 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 8.62 temperature 20.0 10 > th dose independent rect. 9 9
6 8.75 temperature 10.0 10 > th dose dependent rect. 9 9
10 8.80 temperature 15.0 90 > th dose independent rect. 9 20
13 8.83 humidity 90.0 90 < th dose independent rect. 9 8
15 8.84 temperature 15.0 4320 > th dose independent rect. 7 3
16 8.84 wind 1.0 90 > th dose independent rect. 4 5
18 8.85 wind 9.0 10 < th dose independent rect. 9 21
19 8.86 wind 1.0 270 > th dose independent rect. 4 1
21 8.86 temperature 15.0 10 > th dose independent rect. 9 21
26 8.88 atmosphere 995.0 1440 > th dose independent rect. 6 4
27 8.88 atmosphere 1015.0 1440 < th dose independent rect. 6 4
28 8.88 temperature 10.0 1440 > th dose independent rect. 10 20
31 8.89 wind 5.0 10 < th dose independent rect. 6 3
32 8.89 radiation 40.0 10 < th dose independent rect. 6 3
33 8.89 atmosphere 1000.0 90 > th dose independent rect. 20 9
34 8.89 wind 9.0 10 < th dose dependent rect. 6 3
35 8.89 temperature 10.0 10 > th dose dependent rect. 6 3
36 8.90 temperature 25.0 30 > th dose independent rect. 1 8
41 8.91 temperature 10.0 10 > th dose independent rect. 6 3
43 8.91 temperature 30.0 10 < th dose independent rect. 6 3
44 8.91 humidity 50.0 10 > th dose independent rect. 6 3
46 8.91 atmosphere 995.0 10 > th dose independent rect. 6 3
47 8.91 atmosphere 1015.0 10 < th dose independent rect. 6 3
48 8.91 precipitation 0.1 10 < th dose independent rect. 6 3
49 8.91 temperature 25.0 30 > th dose independent rect. 4 5
51 8.91 humidity 90.0 10 < th dose independent rect. 9 9
54 8.91 radiation 40.0 10 < th dose dependent rect. 6 3
55 8.91 precipitation 0.1 10 < th dose dependent rect. 6 3
60 8.92 atmosphere 1000.0 10 > th dose independent rect. 20 10
61 8.92 wind 1.0 270 > th dose independent rect. 4 15
68 8.93 humidity 50.0 10 > th dose dependent rect. 6 3
69 8.94 wind 1.0 10 > th dose independent rect. 6 3
72 8.94 wind 1.0 10 > th dose independent rect. 4 5
77 8.94 temperature 10.0 1440 > th dose independent rect. 21 9
80 8.94 temperature 30.0 1440 < th dose independent rect. 21 9
84 8.94 humidity 50.0 1440 > th dose independent rect. 21 9
90 8.94 atmosphere 995.0 1440 > th dose independent rect. 21 9
91 8.94 radiation 20.0 1440 < th dose independent rect. 21 9
100 8.94 temperature 10.0 1440 > th dose independent rect. 6 15
104 8.94 radiation 40.0 90 < th dose dependent rect. 5 15
119 8.95 atmosphere 995.0 10 > th dose independent rect. 9 21
126 8.96 radiation 1.0 10 > th dose independent rect. 6 3
128 8.96 temperature 15.0 90 > th dose independent rect. 20 9
129 8.96 radiation 1.0 30 > th dose independent rect. 9 10
141 8.96 precipitation 0.1 10 < th dose independent rect. 9 21
146 8.96 humidity 50.0 10 > th dose dependent rect. 6 14
147 8.96 precipitation 0.1 10 < th dose dependent rect. 9 21
161 8.98 precipitation 0.1 90 < th dose independent rect. 5 15
169 8.98 temperature 10.0 10 > th dose dependent rect. 18 15
172 8.98 precipitation 0.1 90 < th dose dependent rect. 5 15
175 8.99 wind 9.0 90 < th dose independent rect. 20 9
177 8.99 temperature 30.0 90 < th dose independent rect. 20 9
178 8.99 humidity 50.0 90 > th dose independent rect. 20 9
182 8.99 radiation 20.0 90 < th dose independent rect. 20 9
185 8.99 precipitation 0.1 90 < th dose independent rect. 20 9
187 8.99 temperature 10.0 90 > th dose independent rect. 5 15
188 8.99 atmosphere 1015.0 90 < th dose independent rect. 5 15
192 8.99 radiation 20.0 90 < th dose dependent rect. 20 9
195 8.99 precipitation 0.1 90 < th dose dependent rect. 20 9
204 9.00 radiation 1.0 90 < th dose independent rect. 20 9
208 9.00 radiation 1.0 90 < th dose dependent rect. 20 9
212 9.01 temperature 20.0 30 > th dose independent rect. 9 6
215 9.01 temperature 15.0 10 > th dose independent rect. 20 10
216 9.01 radiation 40.0 90 < th dose independent rect. 5 15
226 9.02 wind 9.0 10 < th dose independent rect. 20 10
229 9.02 temperature 30.0 10 < th dose independent rect. 20 10
230 9.02 humidity 50.0 10 > th dose independent rect. 20 10
234 9.02 radiation 20.0 10 < th dose independent rect. 20 10
237 9.02 temperature 10.0 10 > th dose independent rect. 6 14
239 9.02 atmosphere 1015.0 10 < th dose independent rect. 6 14
240 9.02 precipitation 0.1 10 < th dose independent rect. 6 14
241 9.02 wind 1.0 30 > th dose independent rect. 18 15
245 9.02 radiation 40.0 10 < th dose dependent rect. 20 10
246 9.02 precipitation 0.1 10 < th dose dependent rect. 6 14
262 9.04 humidity 50.0 14400 > th dose independent rect. 6 3
267 9.04 precipitation 0.1 10 < th dose independent rect. 20 10
268 9.04 humidity 50.0 10 > th dose independent rect. 6 14
274 9.04 precipitation 0.1 10 < th dose dependent rect. 20 10
285 9.05 wind 1.0 270 > th dose independent rect. 19 9
290 9.05 atmosphere 1015.0 10 < th dose dependent rect. 6 3
295 9.06 temperature 15.0 270 > th dose independent rect. 20 7
330 9.07 temperature 25.0 30 > th dose independent rect. 18 15
331 9.07 atmosphere 995.0 90 > th dose independent rect. 5 15
336 9.07 temperature 30.0 10 < th dose dependent rect. 6 14
344 9.08 wind 9.0 10 < th dose independent rect. 9 9
366 9.08 wind 9.0 90 < th dose independent rect. 5 15
367 9.08 humidity 50.0 90 > th dose independent rect. 5 15
377 9.08 atmosphere 1015.0 90 < th dose dependent rect. 6 1
378 9.08 atmosphere 995.0 10 > th dose dependent rect. 6 3
391 9.09 humidity 70.0 30 > th dose independent rect. 6 14
411 9.10 humidity 60.0 30 > th dose independent rect. 18 15
417 9.10 atmosphere 1015.0 10 < th dose independent rect. 9 21
443 9.11 atmosphere 995.0 10 > th dose independent rect. 9 9
444 9.11 precipitation 0.1 10 < th dose independent rect. 9 9
467 9.11 atmosphere 995.0 10 > th dose independent rect. 6 14
469 9.11 temperature 10.0 270 > th dose independent rect. 3 16
470 9.11 atmosphere 1015.0 270 < th dose independent rect. 3 16
479 9.11 precipitation 0.1 10 < th dose dependent rect. 9 9
482 9.11 temperature 10.0 10 > th dose dependent rect. 9 21
491 9.12 humidity 90.0 30 < th dose independent rect. 6 3
498 9.12 wind 9.0 90 < th dose independent rect. 9 8
502 9.12 radiation 1.0 270 > th dose independent rect. 7 8
504 9.12 temperature 10.0 10 > th dose independent rect. 9 9
511 9.12 atmosphere 1015.0 10 < th dose independent rect. 9 9
520 9.12 atmosphere 1010.0 10 < th dose independent rect. 20 10
522 9.12 temperature 10.0 10 > th dose independent rect. 18 15
523 9.12 temperature 30.0 10 < th dose independent rect. 18 15
526 9.12 precipitation 0.1 30 < th dose independent rect. 18 15
527 9.12 wind 9.0 270 < th dose independent rect. 3 16
528 9.12 wind 7.0 90 < th dose independent rect. 17 16
534 9.12 temperature 15.0 10 > th dose dependent rect. 9 6
547 9.12 precipitation 0.1 30 < th dose dependent rect. 18 15
571 9.13 atmosphere 995.0 90 > th dose independent rect. 9 8
596 9.13 atmosphere 995.0 10 > th dose independent rect. 18 15
598 9.13 radiation 40.0 10 < th dose independent rect. 18 15
616 9.13 wind 9.0 10 < th dose dependent rect. 20 10
640 9.14 wind 9.0 1440 < th dose independent rect. 6 3
644 9.14 humidity 50.0 1440 > th dose independent rect. 6 3
672 9.14 wind 1.0 10 > th dose independent rect. 9 9
679 9.14 wind 7.0 10 < th dose independent rect. 18 15
728 9.15 atmosphere 1015.0 90 < th dose independent rect. 9 8
770 9.15 humidity 70.0 90 > th dose dependent rect. 5 11
815 9.16 radiation 40.0 90 < th dose dependent rect. 5 18
819 9.17 temperature 10.0 90 > th dose independent rect. 6 1
821 9.17 temperature 30.0 90 < th dose independent rect. 6 1
822 9.17 humidity 50.0 90 > th dose independent rect. 6 1
825 9.17 atmosphere 995.0 90 > th dose independent rect. 6 1
826 9.17 atmosphere 1010.0 90 < th dose independent rect. 6 1
831 9.17 precipitation 0.1 90 < th dose independent rect. 6 1
838 9.17 humidity 90.0 10 < th dose independent rect. 4 5
849 9.17 wind 9.0 10 < th dose independent rect. 6 14
852 9.17 wind 1.0 30 > th dose independent rect. 15 18
856 9.17 radiation 30.0 90 < th dose dependent rect. 6 1
858 9.17 precipitation 0.1 90 < th dose dependent rect. 6 1
865 9.17 wind 9.0 90 < th dose dependent rect. 20 9
890 9.18 wind 1.0 90 > th dose independent rect. 9 8
901 9.18 atmosphere 995.0 270 > th dose independent rect. 3 16
913 9.18 humidity 60.0 90 > th dose dependent rect. 5 7
916 9.18 humidity 70.0 270 > th dose dependent rect. 3 11
962 9.19 temperature 10.0 1440 > th dose independent rect. 10 9
972 9.19 temperature 10.0 1440 > th dose independent rect. 19 15
975 9.19 atmosphere 995.0 1440 > th dose independent rect. 19 15
976 9.19 radiation 1.0 270 < th dose independent rect. 4 15
981 9.19 humidity 50.0 30 > th dose independent rect. 9 21
985 9.19 wind 9.0 90 < th dose dependent rect. 6 1