Os01g0771900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Exo-beta-glucanase.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0771900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Exo-beta-glucanase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.77 | 0.518 | 7.94 | -1.15 | 0.431 | 1.4 | 0.107 | -0.267 | -0.394 | 15.6 | 21.17 | 4598 | -- | -- |
| 121.83 | 0.514 | 7.94 | -1.1 | 0.421 | 1.39 | 0.0871 | -- | -0.379 | 15.5 | 20.95 | 4640 | -- | -- |
| 121.8 | 0.514 | 7.94 | -1.15 | 0.433 | 1.39 | -- | -0.273 | -0.393 | 15.6 | 21.2 | 4595 | -- | -- |
| 121.85 | 0.514 | 7.93 | -1.08 | 0.428 | 1.39 | -- | -- | -0.379 | 15.6 | 20.98 | 4623 | -- | -- |
| 131.57 | 0.534 | 7.95 | -1.2 | -- | 1.37 | -- | -0.355 | -0.415 | -- | 21.05 | 4742 | -- | -- |
| 177.26 | 0.624 | 7.87 | -0.467 | 0.402 | -- | 0.0311 | -- | -0.101 | 16 | -- | -- | -- | -- |
| 177.27 | 0.623 | 7.87 | -0.467 | 0.402 | -- | -- | -- | -0.101 | 16 | -- | -- | -- | -- |
| 131.65 | 0.534 | 7.93 | -1.1 | -- | 1.37 | -- | -- | -0.391 | -- | 20.84 | 4742 | -- | -- |
| 143.94 | 0.559 | 7.86 | -- | 0.421 | 1.03 | -- | -- | -0.105 | 16.5 | 26 | 5859 | -- | -- |
| 186.11 | 0.637 | 7.87 | -0.483 | -- | -- | -- | -- | -0.112 | -- | -- | -- | -- | -- |
| 183.01 | 0.633 | 7.86 | -- | 0.411 | -- | -- | -- | -0.0491 | 16 | -- | -- | -- | -- |
| 148.95 | 0.57 | 7.9 | -- | -- | 1.32 | -- | -- | -0.24 | -- | 20.84 | 4742 | -- | -- |
| 192.27 | 0.647 | 7.86 | -- | -- | -- | -- | -- | -0.0582 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.20 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 5 |
| 20 | 119.84 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 22 | 119.85 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 26 | 119.89 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 40 | 120.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 102 | 120.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 15 |
| 124 | 121.05 | temperature | 20 | 4320 | > th | dose dependent | sin | 2 | NA |
| 358 | 121.97 | temperature | 10 | 4320 | > th | dose dependent | sin | 1 | NA |
| 403 | 122.05 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 14 |
| 553 | 122.38 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 577 | 122.43 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 637 | 122.57 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 23 |