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Os01g0771100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mitochondrial glycoprotein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.13 (0.0259) R2 : 0.827
β1 : 1.9 (0.0953) R2dD : 0.156 R2D : 0.141
β2 : 2.11 (0.0753) R2dC : 0.374 R2C : 0.54
β3 : 0.912 (0.0592) R2dE : 0.115 R2E : 0.315
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.321 (0.0556) R2dN8 : 0.0172 R2N8 : -0.00535
σ : 0.485
deviance : 108.57
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C
peak time of C : 16.9
E
wheather : radiation
threshold : 10
memory length : 121
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
106.26 0.484 9.13 1.9 2.11 0.896 0.77 0.272 0.322 16.9 10.11 117 -- --
106.48 0.481 9.13 1.9 2.11 0.897 0.912 -- 0.319 16.8 10.01 118 -- --
107.46 0.483 9.12 1.89 2.1 0.896 -- 0.499 0.325 16.8 10.28 121 -- --
108.57 0.485 9.13 1.9 2.11 0.912 -- -- 0.321 16.9 10 121 -- --
128.84 0.529 9.09 1.87 -- 2.58 -- 0.667 0.279 -- 1 480 -- --
126.64 0.528 9.11 2.01 2.69 -- 1.03 -- 0.384 15.8 -- -- -- --
129.77 0.533 9.1 2.03 2.7 -- -- -- 0.39 15.8 -- -- -- --
130.77 0.533 9.11 1.84 -- 2.61 -- -- 0.274 -- 0.83 487 -- --
204.02 0.665 9.13 -- 1.92 1.11 -- -- 0.295 17.1 10.23 136 -- --
530.62 1.08 9.1 1.91 -- -- -- -- 0.318 -- -- -- -- --
237.99 0.722 9.15 -- 2.66 -- -- -- 0.164 15.8 -- -- -- --
216.44 0.685 9.15 -- -- 2.65 -- -- 0.0816 -- 0.009559 493 -- --
627.29 1.17 9.14 -- -- -- -- -- 0.106 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.64 temperature 10.0 270 > th dose dependent rect. 6 9
2 90.82 temperature 10.0 90 > th dose dependent rect. 8 9
23 96.05 radiation 1.0 270 < th dose independent rect. 3 16
26 96.34 temperature 30.0 30 < th dose dependent rect. 4 16
29 96.46 radiation 10.0 270 < th dose dependent rect. 2 17
56 97.60 temperature 10.0 90 > th dose dependent rect. 8 19
58 97.62 temperature 10.0 10 > th dose dependent rect. 8 20
60 97.70 radiation 1.0 30 > th dose independent rect. 8 10
76 98.13 radiation 40.0 270 < th dose dependent rect. 15 15
77 98.20 radiation 40.0 90 < th dose dependent rect. 15 17
92 98.73 wind 7.0 270 < th dose independent rect. 6 9
110 98.93 humidity 50.0 90 > th dose independent rect. 17 15
111 98.94 wind 9.0 90 < th dose independent rect. 8 9
126 98.99 radiation 40.0 90 < th dose dependent rect. 13 19
129 99.03 radiation 30.0 270 < th dose independent rect. 15 15
130 99.03 radiation 20.0 270 < th dose dependent rect. 2 7
135 99.13 radiation 1.0 270 > th dose independent rect. 6 9
138 99.17 atmosphere 1000.0 90 > th dose dependent rect. 3 5
140 99.22 precipitation 0.1 90 < th dose independent rect. 8 9
141 99.22 precipitation 0.1 90 < th dose dependent rect. 8 9
144 99.33 radiation 40.0 90 < th dose dependent rect. 4 17
171 99.72 temperature 10.0 90 > th dose independent rect. 8 9
172 99.72 atmosphere 1015.0 90 < th dose independent rect. 8 9
173 99.72 precipitation 0.1 270 < th dose independent rect. 6 9
174 99.72 temperature 10.0 90 > th dose independent rect. 17 15
175 99.72 precipitation 0.1 270 < th dose dependent rect. 6 9
190 99.84 atmosphere 995.0 90 > th dose independent rect. 17 15
197 99.88 radiation 40.0 90 < th dose independent rect. 17 15
198 99.90 wind 7.0 270 < th dose independent rect. 7 19
210 99.98 radiation 20.0 90 < th dose independent rect. 17 15
211 99.99 wind 5.0 270 < th dose independent rect. 2 5
217 100.05 temperature 30.0 270 < th dose independent rect. 2 17
220 100.09 wind 5.0 270 < th dose independent rect. 3 3
221 100.12 humidity 90.0 90 < th dose independent rect. 8 9
222 100.12 wind 9.0 90 < th dose independent rect. 17 15
230 100.24 radiation 40.0 90 < th dose dependent rect. 17 15
234 100.32 radiation 1.0 270 < th dose independent sin 2 NA
235 100.33 atmosphere 1000.0 270 > th dose dependent rect. 3 2
236 100.33 humidity 60.0 30 > th dose dependent rect. 4 16
237 100.34 atmosphere 1015.0 90 < th dose independent rect. 17 15
238 100.36 temperature 10.0 270 > th dose independent rect. 6 9
239 100.36 atmosphere 1015.0 270 < th dose independent rect. 6 9
240 100.36 temperature 10.0 270 > th dose independent rect. 15 15
247 100.46 wind 9.0 270 < th dose independent rect. 6 21
253 100.52 radiation 1.0 270 > th dose independent sin 2 NA
268 100.69 precipitation 0.1 270 < th dose independent rect. 6 21
269 100.69 precipitation 0.1 270 < th dose dependent rect. 6 21
271 100.72 temperature 25.0 90 > th dose dependent sin 3 NA
281 100.80 precipitation 0.1 270 < th dose independent rect. 19 7
282 100.80 precipitation 0.1 270 < th dose dependent rect. 19 7
299 100.90 atmosphere 1005.0 270 > th dose independent rect. 3 3
300 100.90 precipitation 0.1 270 < th dose independent rect. 7 19
301 100.90 precipitation 0.1 270 < th dose dependent rect. 7 19
305 100.92 atmosphere 1005.0 270 > th dose independent rect. 2 5
307 100.93 humidity 70.0 30 > th dose independent rect. 4 16
310 100.94 humidity 50.0 270 > th dose dependent rect. 20 6
316 100.97 temperature 30.0 90 < th dose independent rect. 4 16
318 100.99 radiation 40.0 270 < th dose independent rect. 2 17
319 101.00 wind 1.0 270 > th dose independent rect. 3 2
320 101.00 precipitation 0.1 270 < th dose independent rect. 3 3
321 101.00 radiation 10.0 270 < th dose independent rect. 2 5
322 101.00 precipitation 0.1 270 < th dose dependent rect. 3 3
323 101.01 temperature 10.0 270 > th dose independent rect. 19 7
324 101.01 temperature 30.0 270 < th dose independent rect. 19 7
325 101.01 humidity 50.0 270 > th dose independent rect. 19 7
326 101.01 atmosphere 995.0 270 > th dose independent rect. 19 7
327 101.01 radiation 1.0 270 < th dose independent rect. 19 7
332 101.01 temperature 10.0 270 > th dose independent rect. 2 17
333 101.01 atmosphere 1015.0 270 < th dose independent rect. 2 17
334 101.01 radiation 1.0 270 < th dose dependent rect. 19 7
347 101.05 radiation 1.0 270 < th dose independent rect. 3 9
352 101.06 wind 9.0 270 < th dose independent rect. 19 7
361 101.11 radiation 20.0 90 < th dose independent rect. 13 19
365 101.12 atmosphere 995.0 270 > th dose independent rect. 6 9
386 101.23 precipitation 0.1 270 < th dose independent rect. 2 5
388 101.23 precipitation 0.1 270 < th dose dependent rect. 2 5
399 101.28 wind 9.0 270 < th dose independent rect. 15 15
443 101.44 radiation 1.0 270 < th dose dependent rect. 3 9
450 101.46 radiation 20.0 30 < th dose independent rect. 4 18
457 101.49 radiation 10.0 270 < th dose dependent rect. 2 12
476 101.56 temperature 10.0 270 > th dose independent rect. 3 3
478 101.56 temperature 30.0 270 < th dose independent rect. 3 3
479 101.56 humidity 50.0 270 > th dose independent rect. 3 3
482 101.56 atmosphere 995.0 270 > th dose independent rect. 3 3
483 101.56 atmosphere 1015.0 270 < th dose independent rect. 3 3
484 101.56 radiation 20.0 270 < th dose independent rect. 3 3
487 101.56 temperature 10.0 270 > th dose independent rect. 6 21
494 101.59 precipitation 0.1 270 < th dose independent rect. 2 17
497 101.59 precipitation 0.1 270 < th dose dependent rect. 2 17
500 101.60 radiation 40.0 270 < th dose dependent rect. 3 3
514 101.64 wind 1.0 270 > th dose independent rect. 2 5
518 101.66 temperature 10.0 1440 > th dose independent rect. 9 9
523 101.66 temperature 10.0 1440 > th dose independent rect. 18 15
526 101.66 humidity 50.0 1440 > th dose independent rect. 18 15
538 101.68 temperature 10.0 270 > th dose independent rect. 2 5
540 101.68 temperature 30.0 270 < th dose independent rect. 2 5
541 101.68 humidity 50.0 270 > th dose independent rect. 2 5
543 101.68 atmosphere 995.0 270 > th dose independent rect. 2 5
544 101.68 atmosphere 1015.0 270 < th dose independent rect. 2 5
545 101.68 radiation 40.0 270 < th dose independent rect. 2 5
548 101.68 temperature 10.0 270 > th dose independent rect. 7 19
561 101.71 radiation 1.0 270 < th dose dependent sin 1 NA
566 101.73 humidity 50.0 270 > th dose independent rect. 6 9
584 101.78 temperature 30.0 10 < th dose independent rect. 4 18
638 101.92 wind 1.0 90 > th dose independent rect. 8 9
659 101.98 atmosphere 995.0 270 > th dose independent rect. 2 17
669 102.00 wind 9.0 10 < th dose independent rect. 8 20
716 102.13 atmosphere 995.0 90 > th dose independent rect. 8 9
717 102.13 precipitation 0.1 270 < th dose independent rect. 15 15
718 102.13 precipitation 0.1 270 < th dose dependent rect. 15 15
773 102.31 atmosphere 995.0 270 > th dose independent rect. 15 15
779 102.32 temperature 25.0 90 > th dose dependent rect. 19 22
784 102.34 precipitation 0.1 90 < th dose independent rect. 17 15
786 102.34 precipitation 0.1 90 < th dose dependent rect. 17 15
795 102.37 wind 9.0 270 < th dose dependent rect. 3 3
802 102.40 radiation 20.0 270 < th dose independent rect. 1 8
818 102.45 temperature 25.0 270 > th dose independent rect. 7 7
819 102.45 wind 9.0 270 < th dose independent rect. 2 17
868 102.55 wind 9.0 270 < th dose dependent rect. 2 5
871 102.56 temperature 10.0 30 > th dose independent rect. 4 4
873 102.56 temperature 30.0 30 < th dose independent rect. 4 4
874 102.56 humidity 50.0 30 > th dose independent rect. 4 4
876 102.56 atmosphere 995.0 30 > th dose independent rect. 4 4
877 102.56 atmosphere 1015.0 30 < th dose independent rect. 4 4
995 102.86 radiation 40.0 90 < th dose independent rect. 4 17