Os01g0769200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteinase inhibitor, propeptide domain containing protein.
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Os01g0769200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteinase inhibitor, propeptide domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.32 | 0.466 | 8.11 | -1.54 | 2.32 | 0.982 | -1.2 | -1.72 | -0.695 | 22.1 | 10.24 | 252 | -- | -- |
| 105.5 | 0.478 | 8.09 | -1.48 | 2.32 | 1.01 | -0.137 | -- | -0.682 | 22.2 | 10.23 | 258 | -- | -- |
| 101.83 | 0.47 | 8.11 | -1.47 | 2.34 | 1 | -- | -0.993 | -0.689 | 22.1 | 10.23 | 248 | -- | -- |
| 105.56 | 0.479 | 8.09 | -1.47 | 2.33 | 1.01 | -- | -- | -0.677 | 22.2 | 10.23 | 257 | -- | -- |
| 181.02 | 0.627 | 8.08 | -1.64 | -- | 1.94 | -- | -0.268 | -1.2 | -- | 10.01 | 949 | -- | -- |
| 122.49 | 0.519 | 8.07 | -1.32 | 2.04 | -- | -0.828 | -- | -0.578 | 20.6 | -- | -- | -- | -- |
| 124.65 | 0.523 | 8.07 | -1.29 | 2.04 | -- | -- | -- | -0.579 | 20.6 | -- | -- | -- | -- |
| 129.73 | 0.53 | 8.08 | -1.47 | -- | 3.13 | -- | -- | -0.827 | -- | 2.77 | 1007 | -- | -- |
| 149.54 | 0.57 | 8.04 | -- | 2.38 | 0.983 | -- | -- | -0.53 | 22.1 | 9.256 | 269 | -- | -- |
| 359.55 | 0.886 | 8.01 | -1.3 | -- | -- | -- | -- | -0.596 | -- | -- | -- | -- | -- |
| 168.84 | 0.608 | 8.03 | -- | 2.05 | -- | -- | -- | -0.434 | 20.6 | -- | -- | -- | -- |
| 184.55 | 0.633 | 8.02 | -- | -- | 2.99 | -- | -- | -0.649 | -- | 3.58 | 1003 | -- | -- |
| 404.18 | 0.938 | 7.98 | -- | -- | -- | -- | -- | -0.452 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.05 | radiation | 20 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 18 | 96.84 | humidity | 80 | 270 | > th | dose independent | rect. | 3 | 15 |
| 21 | 97.24 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 21 |
| 24 | 97.27 | radiation | 10 | 270 | > th | dose independent | rect. | 7 | 10 |
| 26 | 97.42 | radiation | 10 | 270 | > th | dose independent | rect. | 14 | 23 |
| 28 | 97.45 | radiation | 20 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 29 | 97.47 | humidity | 50 | 270 | > th | dose dependent | rect. | 3 | 12 |
| 57 | 97.94 | radiation | 10 | 270 | > th | dose independent | sin | 1 | NA |
| 63 | 98.18 | humidity | 80 | 270 | < th | dose independent | sin | 3 | NA |
| 71 | 98.41 | humidity | 80 | 270 | > th | dose independent | sin | 5 | NA |
| 73 | 98.45 | radiation | 20 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 112 | 98.97 | radiation | 10 | 270 | > th | dose independent | no | NA | NA |
| 221 | 99.06 | radiation | 20 | 270 | < th | dose dependent | no | NA | NA |
| 224 | 99.12 | humidity | 80 | 270 | > th | dose independent | rect. | 3 | 7 |
| 235 | 99.24 | radiation | 20 | 270 | < th | dose dependent | rect. | 4 | 13 |
| 246 | 99.46 | humidity | 80 | 270 | < th | dose independent | rect. | 23 | 17 |
| 248 | 99.51 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 16 |
| 255 | 99.60 | humidity | 50 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 288 | 99.97 | radiation | 20 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 331 | 100.35 | humidity | 50 | 270 | > th | dose dependent | sin | 5 | NA |
| 335 | 100.37 | radiation | 10 | 270 | < th | dose dependent | sin | 1 | NA |
| 343 | 100.43 | humidity | 80 | 270 | < th | dose independent | rect. | 7 | 9 |
| 344 | 100.43 | humidity | 50 | 270 | > th | dose dependent | sin | 3 | NA |
| 378 | 100.61 | radiation | 20 | 90 | < th | dose independent | rect. | 5 | 5 |
| 382 | 100.61 | humidity | 90 | 270 | < th | dose dependent | sin | 4 | NA |
| 387 | 100.63 | radiation | 40 | 90 | < th | dose dependent | rect. | 5 | 5 |
| 402 | 100.70 | humidity | 80 | 90 | > th | dose independent | rect. | 5 | 6 |
| 404 | 100.72 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 2 |
| 407 | 100.77 | radiation | 10 | 270 | < th | dose independent | rect. | 4 | 13 |
| 447 | 101.07 | radiation | 20 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 448 | 101.08 | humidity | 60 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 466 | 101.24 | radiation | 20 | 270 | < th | dose dependent | rect. | 3 | 7 |
| 473 | 101.27 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 493 | 101.33 | radiation | 10 | 270 | < th | dose independent | rect. | 1 | 23 |
| 520 | 101.41 | humidity | 70 | 90 | > th | dose independent | rect. | 5 | 8 |
| 549 | 101.59 | humidity | 90 | 270 | < th | dose dependent | rect. | 22 | 17 |
| 587 | 101.75 | radiation | 10 | 270 | < th | dose independent | rect. | 3 | 7 |
| 590 | 101.77 | radiation | 20 | 270 | < th | dose dependent | sin | 4 | NA |
| 593 | 101.79 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 5 |
| 601 | 101.82 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 633 | 101.95 | radiation | 1 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 685 | 102.14 | radiation | 20 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 714 | 102.24 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 10 |
| 749 | 102.38 | radiation | 10 | 270 | > th | dose independent | rect. | 11 | 23 |
| 789 | 102.54 | radiation | 10 | 270 | < th | dose independent | rect. | 3 | 18 |
| 791 | 102.55 | radiation | 10 | 270 | < th | dose independent | no | NA | NA |
| 847 | 102.74 | radiation | 10 | 270 | < th | dose independent | rect. | 23 | 23 |
| 848 | 102.74 | radiation | 20 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 882 | 102.81 | humidity | 70 | 10 | > th | dose independent | rect. | 6 | 10 |
| 894 | 102.87 | radiation | 40 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 912 | 102.91 | humidity | 90 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 919 | 102.93 | radiation | 20 | 90 | < th | dose independent | rect. | 19 | 15 |
| 921 | 102.94 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 943 | 103.00 | radiation | 1 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 988 | 103.12 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 992 | 103.13 | humidity | 60 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 993 | 103.13 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 995 | 103.14 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 6 |