Os01g0765600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os01g0765600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.17 | 0.475 | 2.9 | -0.0863 | 0.103 | -2.11 | -0.293 | -7.07 | 0.0509 | 9.48 | 9.3 | 91 | -- | -- |
| 111.09 | 0.491 | 2.9 | -0.199 | 0.107 | -1.26 | -0.552 | -- | 0.0335 | 9.67 | 9.38 | 90 | -- | -- |
| 102.45 | 0.471 | 2.9 | -0.0912 | 0.102 | -2.02 | -- | -6.57 | 0.0508 | 9.39 | 9.394 | 90 | -- | -- |
| 107.32 | 0.482 | 2.87 | -0.111 | 0.111 | -0.456 | -- | -- | 0.0596 | 9.53 | 9.309 | 90 | -- | -- |
| 102.84 | 0.472 | 2.91 | -0.106 | -- | -1.72 | -- | -5.42 | 0.0532 | -- | 9.395 | 81 | -- | -- |
| 107.94 | 0.487 | 2.88 | -0.137 | 0.114 | -- | -0.102 | -- | 0.048 | 10 | -- | -- | -- | -- |
| 107.98 | 0.487 | 2.88 | -0.14 | 0.114 | -- | -- | -- | 0.048 | 10.2 | -- | -- | -- | -- |
| 107.89 | 0.484 | 2.88 | -0.108 | -- | -0.443 | -- | -- | 0.0613 | -- | 9.381 | 77 | -- | -- |
| 107.52 | 0.483 | 2.87 | -- | 0.107 | -0.47 | -- | -- | 0.0729 | 9.36 | 9.341 | 77 | -- | -- |
| 108.76 | 0.487 | 2.88 | -0.142 | -- | -- | -- | -- | 0.0477 | -- | -- | -- | -- | -- |
| 108.5 | 0.487 | 2.87 | -- | 0.114 | -- | -- | -- | 0.0636 | 10.3 | -- | -- | -- | -- |
| 108.19 | 0.484 | 2.87 | -- | -- | -0.49 | -- | -- | 0.0743 | -- | 9.371 | 77 | -- | -- |
| 109.3 | 0.488 | 2.88 | -- | -- | -- | -- | -- | 0.0635 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.40 | wind | 7.0 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 2 | 99.56 | wind | 7.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 5 | 99.82 | wind | 7.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 7 | 99.88 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 30 | 99.88 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 62 | 100.11 | wind | 7.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 74 | 100.73 | wind | 7.0 | 10 | > th | dose independent | rect. | 10 | 5 |
| 77 | 100.96 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 89 | 100.96 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 99 | 101.05 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 3 |
| 114 | 101.11 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 115 | 101.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 118 | 101.11 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 122 | 101.11 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 132 | 101.11 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 133 | 101.11 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 153 | 101.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 156 | 101.11 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 166 | 101.14 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 169 | 101.16 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 170 | 101.16 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 172 | 101.18 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 175 | 101.19 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 177 | 101.20 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 186 | 101.24 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 188 | 101.25 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 190 | 101.25 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 192 | 101.26 | wind | 5.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 195 | 101.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 197 | 101.26 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 198 | 101.26 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 203 | 101.26 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 205 | 101.26 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 210 | 101.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 211 | 101.26 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 219 | 101.27 | wind | 9.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 226 | 101.31 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 256 | 101.35 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 261 | 101.38 | wind | 7.0 | 90 | < th | dose independent | sin | 4 | NA |
| 270 | 101.41 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 275 | 101.44 | wind | 7.0 | 90 | > th | dose independent | sin | 4 | NA |
| 283 | 101.51 | wind | 7.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 284 | 101.51 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 8 |
| 292 | 101.53 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 293 | 101.53 | wind | 5.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 304 | 101.57 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 3 |
| 317 | 101.60 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 352 | 101.68 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 359 | 101.71 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 397 | 101.80 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 399 | 101.80 | wind | 5.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 403 | 101.81 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 406 | 101.82 | humidity | 80.0 | 720 | < th | dose independent | rect. | 3 | 3 |
| 411 | 101.82 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 435 | 101.84 | wind | 7.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 446 | 101.85 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 15 |
| 449 | 101.86 | wind | 9.0 | 720 | > th | dose independent | rect. | 10 | 1 |
| 476 | 101.90 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 481 | 101.90 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 533 | 101.95 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 540 | 101.95 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 575 | 102.00 | wind | 9.0 | 90 | > th | dose independent | rect. | 14 | 21 |
| 664 | 102.07 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 729 | 102.13 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 882 | 102.25 | wind | 9.0 | 90 | > th | dose dependent | rect. | 14 | 21 |
| 912 | 102.31 | wind | 7.0 | 10 | < th | dose independent | sin | 3 | NA |