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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0765500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.34 (0.0241) R2 : 0.00534
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0793 (0.0506) R2dN8 : 0.0069 R2N8 : 0.00534
σ : 0.453
deviance : 94.18
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
83.92 0.43 3.34 0.17 0.191 -0.46 0.245 1.18 0.1 10.5 1.138 16 -- --
85.27 0.43 3.33 0.223 0.195 -0.38 0.304 -- 0.115 10.4 1.149 16 -- --
84.16 0.427 3.34 0.179 0.19 -0.457 -- 1.22 0.1 10.3 1.111 16 -- --
85.63 0.431 3.33 0.236 0.196 -0.365 -- -- 0.115 10 1.153 16 -- --
86.33 0.433 3.35 0.177 -- -0.49 -- 1.43 0.0964 -- 1.082 16 -- --
88.85 0.442 3.33 0.28 0.234 -- 0.206 -- 0.109 8.33 -- -- -- --
88.97 0.442 3.33 0.285 0.235 -- -- -- 0.108 8.09 -- -- -- --
87.93 0.437 3.34 0.234 -- -0.366 -- -- 0.114 -- 1.132 16 -- --
87.07 0.435 3.34 -- 0.194 -0.397 -- -- 0.0895 10.1 1.127 16 -- --
92.01 0.448 3.34 0.287 -- -- -- -- 0.111 -- -- -- -- --
91.11 0.447 3.34 -- 0.237 -- -- -- 0.0765 8.01 -- -- -- --
89.34 0.44 3.34 -- -- -0.396 -- -- 0.0893 -- 1.173 16 -- --
94.18 0.453 3.34 -- -- -- -- -- 0.0793 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 78.45 temperature 20.0 30 > th dose dependent rect. 2 1
2 78.49 temperature 20.0 30 > th dose independent rect. 2 1
4 78.59 atmosphere 1005.0 30 > th dose dependent rect. 2 1
7 78.65 atmosphere 1000.0 30 > th dose independent rect. 2 1
10 78.68 humidity 90.0 30 > th dose independent rect. 2 1
11 78.72 wind 5.0 30 < th dose dependent rect. 2 1
14 78.74 wind 5.0 30 < th dose independent rect. 2 1
18 78.75 humidity 70.0 30 > th dose dependent rect. 2 1
19 78.76 humidity 50.0 30 > th dose dependent rect. 2 1
23 78.78 temperature 10.0 30 > th dose independent rect. 2 1
25 78.78 temperature 30.0 30 < th dose independent rect. 2 1
26 78.78 humidity 50.0 30 > th dose independent rect. 2 1
31 78.78 atmosphere 1010.0 30 < th dose independent rect. 2 1
33 78.78 radiation 1.0 30 < th dose independent rect. 2 1
38 78.78 precipitation 0.1 30 < th dose independent rect. 2 1
39 78.78 temperature 10.0 30 > th dose independent rect. 3 23
40 78.78 radiation 1.0 30 < th dose dependent rect. 2 1
45 78.78 precipitation 0.1 30 < th dose dependent rect. 2 1
48 79.11 atmosphere 1015.0 30 < th dose dependent rect. 2 1
54 79.32 wind 1.0 30 > th dose independent rect. 2 1
55 79.33 temperature 30.0 30 < th dose dependent rect. 2 1
58 79.56 radiation 10.0 14400 < th dose dependent rect. 3 1
62 79.59 wind 9.0 1440 < th dose independent rect. 3 1
63 79.59 temperature 10.0 1440 > th dose independent rect. 3 1
66 79.59 temperature 30.0 1440 < th dose independent rect. 3 1
70 79.59 humidity 50.0 1440 > th dose independent rect. 3 1
79 79.59 atmosphere 995.0 1440 > th dose independent rect. 3 1
80 79.59 radiation 1.0 1440 < th dose independent rect. 3 1
100 79.59 temperature 10.0 1440 > th dose independent rect. 4 23
104 79.59 radiation 1.0 1440 < th dose dependent rect. 3 1
168 80.74 atmosphere 995.0 30 > th dose independent rect. 3 23
175 81.04 precipitation 0.1 30 < th dose independent rect. 3 23
176 81.04 precipitation 0.1 30 < th dose dependent rect. 3 23
187 81.49 wind 9.0 30 < th dose independent rect. 3 23
199 82.38 humidity 50.0 30 > th dose independent rect. 3 23
224 82.51 wind 1.0 10 > th dose independent rect. 23 8
228 82.69 wind 1.0 30 > th dose independent rect. 21 10
230 82.72 wind 1.0 10 > th dose independent rect. 21 23
245 83.31 radiation 10.0 43200 < th dose dependent rect. 21 1
248 83.39 humidity 90.0 90 < th dose independent rect. 2 1
257 83.57 wind 1.0 30 > th dose independent rect. 3 23
278 83.97 wind 9.0 1440 < th dose independent rect. 21 1
280 83.99 humidity 80.0 30 > th dose independent rect. 20 1
281 84.00 wind 3.0 30 > th dose independent rect. 20 1
284 84.01 wind 1.0 10 > th dose independent rect. 23 23
285 84.02 temperature 20.0 30 > th dose independent rect. 20 1
286 84.03 wind 5.0 30 < th dose independent rect. 20 1
287 84.03 humidity 50.0 30 > th dose dependent rect. 20 1
291 84.04 atmosphere 1000.0 30 > th dose independent rect. 20 1
295 84.06 temperature 10.0 30 > th dose independent rect. 20 1
297 84.06 temperature 30.0 30 < th dose independent rect. 20 1
298 84.06 humidity 50.0 30 > th dose independent rect. 20 1
303 84.06 atmosphere 1010.0 30 < th dose independent rect. 20 1
305 84.06 radiation 1.0 30 < th dose independent rect. 20 1
310 84.06 precipitation 0.1 30 < th dose independent rect. 20 1
311 84.06 temperature 10.0 30 > th dose independent rect. 21 23
312 84.06 temperature 10.0 30 > th dose dependent rect. 20 1
314 84.06 radiation 1.0 30 < th dose dependent rect. 20 1
319 84.06 precipitation 0.1 30 < th dose dependent rect. 20 1
320 84.07 wind 9.0 30 < th dose dependent rect. 20 1
321 84.07 atmosphere 995.0 30 > th dose dependent rect. 20 1
322 84.08 temperature 10.0 1440 > th dose independent rect. 21 1
325 84.08 temperature 30.0 1440 < th dose independent rect. 21 1
329 84.08 humidity 50.0 1440 > th dose independent rect. 21 1
335 84.08 atmosphere 995.0 1440 > th dose independent rect. 21 1
336 84.08 radiation 1.0 1440 < th dose independent rect. 21 1
356 84.08 temperature 10.0 1440 > th dose independent rect. 22 23
359 84.08 wind 1.0 30 > th dose dependent rect. 20 1
366 84.10 atmosphere 1015.0 30 < th dose dependent rect. 20 1
370 84.11 humidity 90.0 30 < th dose independent rect. 20 1
376 84.18 wind 9.0 30 < th dose independent rect. 21 23
379 84.20 temperature 30.0 30 < th dose dependent rect. 20 1
384 84.29 wind 1.0 10 > th dose independent rect. 14 17
387 84.32 temperature 25.0 270 > th dose independent rect. 23 4
392 84.33 humidity 90.0 30 < th dose dependent rect. 20 1
394 84.34 wind 1.0 10 > th dose independent rect. 16 15
395 84.34 wind 1.0 10 > th dose independent rect. 12 19
401 84.36 wind 1.0 10 > th dose independent rect. 23 21
405 84.39 temperature 30.0 30 < th dose independent rect. 3 23
437 84.49 temperature 25.0 30 > th dose independent rect. 24 7
472 84.77 wind 1.0 10 > th dose independent rect. 9 23
474 84.79 radiation 10.0 10 < th dose independent rect. 6 20
482 84.90 atmosphere 1015.0 30 < th dose independent rect. 3 23
483 84.91 wind 1.0 10 < th dose independent rect. 2 4
493 84.98 wind 1.0 10 < th dose independent rect. 2 6
502 85.03 wind 1.0 10 > th dose independent sin 13 NA
530 85.06 wind 1.0 10 > th dose independent no NA NA
586 85.12 wind 1.0 30 < th dose independent rect. 2 12
594 85.15 radiation 10.0 10 < th dose independent rect. 21 14
596 85.15 radiation 10.0 10 < th dose independent rect. 4 22
599 85.17 wind 1.0 30 < th dose independent rect. 2 10
626 85.19 humidity 80.0 10 > th dose independent rect. 23 12
635 85.22 temperature 10.0 1440 > th dose independent rect. 22 10
638 85.22 temperature 30.0 1440 < th dose independent rect. 22 10
642 85.22 humidity 50.0 1440 > th dose independent rect. 22 10
647 85.22 atmosphere 995.0 1440 > th dose independent rect. 22 10
649 85.22 temperature 10.0 1440 > th dose independent rect. 8 14
654 85.23 temperature 25.0 30 > th dose independent rect. 3 4
661 85.26 radiation 10.0 4320 < th dose dependent rect. 9 1
673 85.29 wind 3.0 43200 > th dose dependent rect. 23 6
676 85.30 atmosphere 1000.0 10 > th dose independent rect. 14 12
680 85.30 wind 3.0 43200 > th dose dependent rect. 1 3
689 85.32 humidity 80.0 30 > th dose independent rect. 21 14
710 85.35 radiation 40.0 30 < th dose independent rect. 14 12
716 85.35 wind 1.0 10 < th dose independent rect. 2 22
719 85.36 humidity 70.0 90 > th dose independent rect. 21 10
723 85.37 radiation 20.0 90 < th dose independent rect. 21 10
728 85.38 temperature 10.0 90 > th dose independent rect. 21 10
729 85.38 temperature 30.0 90 < th dose independent rect. 21 10
730 85.38 humidity 50.0 90 > th dose independent rect. 21 10
732 85.38 atmosphere 995.0 90 > th dose independent rect. 21 10
735 85.38 temperature 10.0 90 > th dose independent rect. 7 14
736 85.38 atmosphere 1015.0 90 < th dose independent rect. 7 14
739 85.39 wind 9.0 90 < th dose independent rect. 21 10
749 85.39 wind 9.0 90 < th dose independent rect. 7 14
758 85.40 humidity 60.0 10 > th dose independent rect. 14 12
765 85.42 wind 1.0 30 > th dose independent rect. 3 4
773 85.44 radiation 10.0 10 < th dose independent rect. 23 12
785 85.48 radiation 10.0 4320 > th dose independent rect. 9 1
803 85.51 atmosphere 995.0 720 > th dose independent rect. 3 23
804 85.51 atmosphere 995.0 30 > th dose independent rect. 21 23
806 85.52 radiation 10.0 4320 < th dose independent rect. 9 1
811 85.53 atmosphere 1000.0 10 > th dose independent rect. 2 12
812 85.53 precipitation 0.1 30 < th dose independent rect. 7 14
814 85.53 precipitation 0.1 30 < th dose dependent rect. 7 14
815 85.53 radiation 1.0 90 < th dose dependent rect. 1 22
821 85.56 wind 1.0 90 > th dose independent rect. 4 13
825 85.57 atmosphere 995.0 720 > th dose independent rect. 14 1
827 85.57 wind 1.0 30 < th dose independent rect. 4 23
831 85.59 wind 1.0 30 > th dose independent sin 3 NA
838 85.60 wind 9.0 10 < th dose independent rect. 2 12
839 85.60 temperature 10.0 10 > th dose independent rect. 2 12
841 85.60 temperature 10.0 10 > th dose independent rect. 14 12
843 85.60 atmosphere 1015.0 10 < th dose independent rect. 2 12
851 85.61 radiation 30.0 90 < th dose dependent rect. 21 13
855 85.63 wind 3.0 43200 > th dose dependent rect. 4 1
862 85.65 precipitation 0.1 10 < th dose independent rect. 2 12
864 85.65 precipitation 0.1 10 < th dose dependent rect. 2 12
867 85.66 wind 1.0 10 > th dose independent rect. 11 23
872 85.67 wind 5.0 43200 < th dose independent rect. 2 4
876 85.67 wind 5.0 43200 < th dose independent rect. 22 8
886 85.69 wind 5.0 43200 > th dose independent rect. 2 4
888 85.69 precipitation 0.1 90 < th dose independent rect. 21 10
890 85.69 wind 9.0 43200 < th dose independent rect. 21 16
898 85.69 precipitation 0.1 90 < th dose dependent rect. 21 10
902 85.70 radiation 20.0 90 < th dose independent rect. 21 13
903 85.70 atmosphere 995.0 720 > th dose independent rect. 15 23
904 85.70 temperature 20.0 270 > th dose dependent rect. 7 1
909 85.71 wind 1.0 720 > th dose independent rect. 14 1
913 85.71 wind 5.0 43200 > th dose independent rect. 22 8
925 85.71 precipitation 0.1 10 < th dose independent rect. 14 12
936 85.71 radiation 40.0 10 < th dose dependent rect. 14 12
937 85.71 precipitation 0.1 10 < th dose dependent rect. 14 12
948 85.72 wind 9.0 43200 < th dose dependent rect. 2 1
961 85.74 precipitation 0.1 720 < th dose independent rect. 14 1
963 85.74 wind 9.0 10 < th dose independent rect. 14 12
965 85.74 precipitation 0.1 720 < th dose independent rect. 3 23
968 85.74 precipitation 0.1 720 < th dose dependent rect. 14 1
971 85.74 precipitation 0.1 720 < th dose dependent rect. 3 23
983 85.76 temperature 10.0 1440 > th dose independent rect. 24 8
986 85.76 temperature 30.0 1440 < th dose independent rect. 24 8
990 85.76 humidity 50.0 1440 > th dose independent rect. 24 8
995 85.76 atmosphere 995.0 1440 > th dose independent rect. 24 8
996 85.76 humidity 50.0 10 > th dose independent rect. 2 12
999 85.76 temperature 10.0 1440 > th dose independent rect. 8 16