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Os01g0764600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Fosfomycin resistance kinase FomA family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0153) R2 : 0.327
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.536 (0.0363) R2dC : 0.322 R2C : 0.321
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0566 (0.0321) R2dN8 : 0.00592 R2N8 : 0.00461
σ : 0.288
deviance : 37.94
__
_____
C
peak time of C : 23.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.16 0.271 12.2 -0.257 0.55 -0.378 -0.518 -0.35 0.0474 23.8 40 4301 -- --
33.31 0.269 12.2 -0.248 0.542 -0.369 -0.534 -- 0.0452 23.8 40 4300 -- --
34.29 0.273 12.2 -0.246 0.546 -0.386 -- -0.356 0.0521 24 40 4320 -- --
34.45 0.273 12.2 -0.219 0.541 -0.386 -- -- 0.0497 24 40 4320 -- --
50.95 0.334 12.2 -0.191 -- -0.542 -- 0.414 0.0308 -- 39.85 4626 -- --
35.78 0.28 12.2 -0.199 0.536 -- -0.563 -- 0.0352 23.7 -- -- -- --
37.11 0.285 12.2 -0.177 0.539 -- -- -- 0.0369 23.9 -- -- -- --
51.09 0.334 12.2 -0.184 -- -0.56 -- -- 0.0327 -- 38.74 4598 -- --
35.71 0.278 12.2 -- 0.541 -0.352 -- -- 0.0653 23.9 40 4301 -- --
55.37 0.348 12.2 -0.161 -- -- -- -- 0.0441 -- -- -- -- --
37.94 0.288 12.2 -- 0.536 -- -- -- 0.0566 23.9 -- -- -- --
51.93 0.337 12.2 -- -- -0.526 -- -- 0.0533 -- 36.88 4598 -- --
56.05 0.349 12.2 -- -- -- -- -- 0.0619 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.41 temperature 20.0 270 > th dose independent rect. 3 6
5 31.91 temperature 15.0 270 > th dose dependent rect. 3 6
7 32.08 temperature 25.0 90 > th dose dependent rect. 6 3
11 32.10 temperature 15.0 10 > th dose independent rect. 9 23
13 32.11 temperature 20.0 270 > th dose independent rect. 4 15
16 32.12 wind 1.0 43200 < th dose dependent rect. 3 9
21 32.16 temperature 15.0 270 > th dose independent rect. 19 9
25 32.25 wind 1.0 43200 > th dose independent rect. 3 8
34 32.30 radiation 10.0 43200 > th dose independent rect. 9 1
40 32.35 wind 1.0 43200 < th dose dependent rect. 1 12
42 32.36 temperature 15.0 270 > th dose independent rect. 9 18
43 32.36 temperature 20.0 10 > th dose dependent rect. 5 5
51 32.42 wind 1.0 43200 < th dose independent rect. 3 9
63 32.47 wind 1.0 43200 > th dose independent rect. 24 10
66 32.48 temperature 15.0 10 > th dose independent rect. 12 17
67 32.49 temperature 15.0 90 > th dose independent rect. 12 15
74 32.51 wind 1.0 43200 < th dose independent rect. 1 11
80 32.54 wind 1.0 43200 > th dose independent rect. 3 2
88 32.57 wind 1.0 43200 < th dose dependent sin 5 NA
96 32.60 temperature 15.0 90 > th dose independent rect. 12 17
110 32.64 temperature 30.0 14400 > th dose independent rect. 17 16
113 32.65 temperature 30.0 14400 > th dose independent rect. 17 2
117 32.65 radiation 20.0 4320 > th dose independent rect. 6 5
134 32.65 temperature 30.0 14400 < th dose independent rect. 17 13
146 32.65 precipitation 0.1 43200 > th dose dependent rect. 19 11
147 32.66 wind 1.0 43200 < th dose independent rect. 3 2
148 32.66 temperature 30.0 14400 < th dose independent rect. 17 2
163 32.66 radiation 10.0 43200 < th dose dependent rect. 9 1
175 32.68 wind 1.0 43200 < th dose dependent rect. 3 1
179 32.68 wind 1.0 43200 < th dose dependent rect. 1 18
184 32.69 precipitation 0.1 43200 > th dose dependent sin 12 NA
185 32.69 precipitation 0.1 43200 > th dose dependent rect. 22 6
187 32.69 precipitation 0.1 43200 > th dose dependent rect. 5 23
188 32.70 wind 1.0 43200 < th dose independent sin 7 NA
190 32.70 precipitation 0.1 43200 > th dose independent rect. 22 2
191 32.70 precipitation 0.1 43200 < th dose independent rect. 22 2
195 32.70 precipitation 0.1 43200 > th dose dependent rect. 22 2
196 32.70 precipitation 0.1 43200 < th dose dependent rect. 22 2
199 32.70 precipitation 0.1 43200 > th dose dependent rect. 18 13
200 32.70 precipitation 0.1 43200 > th dose dependent rect. 19 22
202 32.71 wind 1.0 43200 > th dose independent sin 7 NA
203 32.71 temperature 15.0 1440 > th dose independent rect. 16 8
204 32.71 precipitation 0.1 43200 > th dose dependent no NA NA
207 32.71 wind 1.0 43200 < th dose dependent rect. 1 20
209 32.71 precipitation 0.1 43200 > th dose dependent rect. 15 22
210 32.71 precipitation 0.1 43200 > th dose dependent rect. 1 23
212 32.71 precipitation 0.1 43200 > th dose dependent rect. 9 23
213 32.71 precipitation 0.1 43200 > th dose dependent rect. 13 23
221 32.72 precipitation 0.1 43200 > th dose dependent rect. 11 21
236 32.72 precipitation 0.1 43200 > th dose dependent rect. 21 23
237 32.72 precipitation 0.1 43200 > th dose dependent rect. 23 23
240 32.73 temperature 25.0 14400 > th dose dependent rect. 23 1
243 32.73 precipitation 0.1 43200 > th dose dependent rect. 18 20
261 32.74 wind 1.0 43200 < th dose dependent rect. 1 7
267 32.74 wind 1.0 43200 < th dose dependent rect. 3 18
284 32.75 wind 1.0 43200 > th dose independent rect. 24 7
285 32.75 precipitation 0.1 43200 > th dose independent rect. 19 11
286 32.75 precipitation 0.1 43200 < th dose independent rect. 19 11
288 32.75 precipitation 0.1 43200 > th dose independent rect. 16 15
291 32.75 precipitation 0.1 43200 < th dose independent rect. 15 16
292 32.75 radiation 20.0 10 < th dose dependent sin 9 NA
297 32.75 precipitation 0.1 43200 < th dose dependent rect. 19 11
300 32.75 precipitation 0.1 43200 < th dose dependent rect. 15 16
301 32.75 precipitation 0.1 43200 > th dose dependent rect. 14 18
302 32.75 precipitation 0.1 43200 > th dose dependent rect. 18 18
315 32.76 precipitation 0.1 43200 > th dose independent sin 12 NA
316 32.76 precipitation 0.1 43200 < th dose independent sin 12 NA
320 32.76 precipitation 0.1 43200 < th dose independent rect. 6 15
322 32.76 precipitation 0.1 43200 < th dose independent rect. 15 21
325 32.76 precipitation 0.1 43200 > th dose independent rect. 19 23
327 32.76 precipitation 0.1 43200 < th dose independent rect. 19 23
328 32.76 precipitation 0.1 43200 < th dose dependent sin 12 NA
330 32.76 precipitation 0.1 43200 < th dose dependent rect. 6 15
332 32.76 precipitation 0.1 43200 > th dose dependent rect. 15 16
335 32.76 precipitation 0.1 43200 > th dose dependent rect. 5 19
342 32.76 precipitation 0.1 43200 < th dose dependent rect. 15 21
347 32.76 precipitation 0.1 43200 < th dose dependent rect. 19 23
350 32.77 precipitation 0.1 43200 > th dose independent rect. 22 6
356 32.77 precipitation 0.1 43200 > th dose independent rect. 6 15
358 32.77 precipitation 0.1 43200 > th dose independent rect. 13 19
360 32.77 precipitation 0.1 43200 > th dose independent rect. 15 21
367 32.77 precipitation 0.1 43200 > th dose dependent rect. 6 14
385 32.78 precipitation 0.1 43200 < th dose independent rect. 22 6
407 32.78 precipitation 0.1 43200 < th dose independent rect. 13 19
415 32.78 precipitation 0.1 43200 > th dose independent rect. 3 21
419 32.78 precipitation 0.1 43200 < th dose independent rect. 3 21
430 32.78 precipitation 0.1 43200 > th dose independent rect. 5 23
432 32.78 precipitation 0.1 43200 > th dose independent rect. 22 23
434 32.78 precipitation 0.1 43200 < th dose independent rect. 5 23
436 32.78 precipitation 0.1 43200 < th dose independent rect. 22 23
437 32.78 precipitation 0.1 43200 > th dose dependent sin 0 NA
440 32.78 precipitation 0.1 43200 < th dose dependent rect. 22 6
446 32.78 precipitation 0.1 43200 < th dose dependent rect. 13 19
451 32.78 precipitation 0.1 43200 < th dose dependent rect. 3 21
460 32.78 precipitation 0.1 43200 < th dose dependent rect. 5 23
462 32.78 precipitation 0.1 43200 < th dose dependent rect. 22 23
465 32.79 temperature 30.0 14400 > th dose independent rect. 11 1
470 32.79 precipitation 0.1 43200 > th dose independent rect. 6 12
471 32.79 precipitation 0.1 43200 < th dose independent rect. 6 12
472 32.79 precipitation 0.1 43200 < th dose independent rect. 17 13
500 32.79 precipitation 0.1 43200 < th dose independent rect. 9 23
506 32.79 precipitation 0.1 43200 < th dose dependent rect. 6 12
507 32.79 precipitation 0.1 43200 < th dose dependent rect. 17 13
531 32.79 precipitation 0.1 43200 < th dose dependent rect. 9 23
535 32.80 precipitation 0.1 43200 > th dose independent no NA NA
536 32.80 precipitation 0.1 43200 < th dose independent no NA NA
548 32.80 precipitation 0.1 43200 < th dose independent rect. 5 19
568 32.80 precipitation 0.1 43200 < th dose dependent no NA NA
573 32.80 precipitation 0.1 43200 > th dose dependent rect. 18 16
579 32.80 precipitation 0.1 43200 < th dose dependent rect. 5 19
594 32.81 radiation 20.0 4320 > th dose independent sin 9 NA
595 32.81 temperature 30.0 14400 < th dose independent rect. 11 1
609 32.81 precipitation 0.1 43200 > th dose independent rect. 5 19
656 32.82 temperature 25.0 14400 > th dose independent rect. 5 1
677 32.82 wind 7.0 43200 < th dose dependent rect. 3 3
716 32.83 wind 5.0 43200 < th dose dependent rect. 4 1
726 32.83 radiation 10.0 4320 < th dose dependent rect. 18 14
743 32.84 precipitation 0.1 43200 > th dose independent sin 0 NA
744 32.84 precipitation 0.1 43200 < th dose independent sin 0 NA
745 32.84 wind 1.0 43200 < th dose independent rect. 24 5
763 32.84 precipitation 0.1 43200 < th dose dependent sin 0 NA
765 32.84 temperature 25.0 14400 > th dose dependent rect. 4 3
773 32.84 radiation 10.0 4320 < th dose dependent rect. 2 6
797 32.85 temperature 25.0 14400 < th dose independent rect. 5 1
798 32.85 wind 1.0 43200 > th dose independent rect. 3 4
806 32.85 temperature 30.0 14400 > th dose independent rect. 17 19
807 32.85 temperature 30.0 14400 < th dose independent rect. 17 19
838 32.85 radiation 10.0 4320 < th dose dependent rect. 4 4
839 32.85 radiation 40.0 4320 < th dose dependent rect. 1 5
841 32.85 precipitation 0.1 43200 > th dose dependent rect. 19 5
849 32.85 precipitation 0.1 43200 > th dose dependent rect. 6 11
853 32.85 radiation 10.0 4320 < th dose dependent rect. 17 17
865 32.86 temperature 25.0 14400 < th dose independent rect. 24 1
916 32.86 radiation 40.0 4320 < th dose dependent rect. 7 1
950 32.87 temperature 25.0 14400 > th dose independent rect. 24 1
952 32.87 radiation 20.0 4320 > th dose independent rect. 9 2
954 32.87 wind 1.0 43200 > th dose independent rect. 24 5
970 32.87 wind 1.0 43200 > th dose dependent rect. 4 1
973 32.87 radiation 1.0 4320 > th dose dependent rect. 7 1
980 32.87 temperature 10.0 10 > th dose dependent rect. 5 7
996 32.88 wind 1.0 43200 < th dose independent rect. 24 7