Os01g0763300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0763300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.38 | 0.201 | 13.8 | -0.2 | 0.22 | 0.503 | -0.0288 | 0.84 | -0.262 | 9.42 | 70.31 | 6593 | -- | -- |
| 19.46 | 0.205 | 13.8 | -0.232 | 0.208 | 0.544 | -0.112 | -- | -0.275 | 9.42 | 70.04 | 6589 | -- | -- |
| 18.35 | 0.2 | 13.8 | -0.202 | 0.218 | 0.518 | -- | 0.878 | -0.252 | 9.36 | 69.61 | 6601 | -- | -- |
| 19.47 | 0.206 | 13.8 | -0.252 | 0.23 | 0.558 | -- | -- | -0.282 | 9.24 | 70.09 | 6586 | -- | -- |
| 20.3 | 0.21 | 13.8 | -0.229 | -- | 0.495 | -- | 0.861 | -0.231 | -- | 69.99 | 5881 | -- | -- |
| 24.39 | 0.232 | 13.8 | -0.289 | 0.162 | -- | -0.115 | -- | -0.191 | 9.69 | -- | -- | -- | -- |
| 24.43 | 0.231 | 13.8 | -0.293 | 0.164 | -- | -- | -- | -0.191 | 9.5 | -- | -- | -- | -- |
| 21.35 | 0.215 | 13.8 | -0.27 | -- | 0.562 | -- | -- | -0.255 | -- | 69.62 | 5881 | -- | -- |
| 21.12 | 0.214 | 13.8 | -- | 0.224 | 0.597 | -- | -- | -0.247 | 9.33 | 69 | 6601 | -- | -- |
| 26.01 | 0.238 | 13.8 | -0.294 | -- | -- | -- | -- | -0.191 | -- | -- | -- | -- | -- |
| 26.7 | 0.242 | 13.8 | -- | 0.164 | -- | -- | -- | -0.159 | 9.63 | -- | -- | -- | -- |
| 22.95 | 0.223 | 13.8 | -- | -- | 0.589 | -- | -- | -0.136 | -- | 66.44 | 5849 | -- | -- |
| 28.3 | 0.248 | 13.8 | -- | -- | -- | -- | -- | -0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.17 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 3 | 16.26 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 4 | 16.27 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 10 | 16.35 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 13 | 16.37 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 20 | 16.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 22 | 16.52 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 26 | 16.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 27 | 16.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 28 | 16.57 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 31 | 16.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 42 | 16.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 43 | 16.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 46 | 16.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 47 | 16.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 48 | 16.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 49 | 16.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 71 | 16.83 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 97 | 16.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 107 | 17.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 113 | 17.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 115 | 17.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 120 | 17.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 122 | 17.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 133 | 17.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 136 | 17.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 137 | 17.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 171 | 17.18 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 7 |
| 172 | 17.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 173 | 17.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 178 | 17.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 180 | 17.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 192 | 17.26 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 196 | 17.27 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 197 | 17.27 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 204 | 17.29 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 218 | 17.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 225 | 17.33 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 233 | 17.34 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 276 | 17.44 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 333 | 17.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 16 |
| 340 | 17.58 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 379 | 17.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 385 | 17.65 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 389 | 17.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 398 | 17.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 455 | 17.72 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 475 | 17.75 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 502 | 17.77 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 515 | 17.79 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 547 | 17.83 | humidity | 60.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 580 | 17.83 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 670 | 17.85 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 676 | 17.86 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 730 | 17.86 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 773 | 17.89 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 22 |
| 796 | 17.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 864 | 17.94 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 882 | 17.96 | wind | 1.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 894 | 17.97 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 906 | 17.97 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 907 | 17.97 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 22 |
| 914 | 17.98 | wind | 1.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 952 | 17.99 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 953 | 17.99 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 974 | 18.00 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 987 | 18.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 995 | 18.02 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 3 |