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Os01g0763000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0252) R2 : 0.501
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.41 (0.0659) R2dC : 0.499 R2C : 0.498
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0719 (0.0531) R2dN8 : 0.00259 R2N8 : 0.00226
σ : 0.476
deviance : 103.64
__
_____
C
peak time of C : 17.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.89 0.448 11.5 0.258 1.35 -0.768 0.609 -1.1 -0.0811 17.9 39.5 73 -- --
92.83 0.449 11.5 0.238 1.35 -0.693 0.611 -- -0.0891 17.8 40.02 70 -- --
91.74 0.446 11.5 0.25 1.35 -0.756 -- -1.11 -0.0774 17.8 39.5 70 -- --
93.78 0.451 11.5 0.234 1.36 -0.715 -- -- -0.085 17.8 40.08 70 -- --
103.57 0.474 11.5 0.0523 -- -1.53 -- 0.158 -0.179 -- 0.4858 652 -- --
101.46 0.472 11.5 0.235 1.41 -- 0.542 -- -0.0484 17.2 -- -- -- --
102.19 0.473 11.5 0.234 1.41 -- -- -- -0.0459 17.2 -- -- -- --
102.97 0.473 11.5 0.105 -- -1.57 -- -- -0.159 -- 0.7101 655 -- --
95.34 0.455 11.5 -- 1.35 -0.716 -- -- -0.103 17.8 40.06 70 -- --
205.99 0.671 11.4 0.185 -- -- -- -- -0.0812 -- -- -- -- --
103.64 0.476 11.5 -- 1.41 -- -- -- -0.0719 17.2 -- -- -- --
102.83 0.472 11.4 -- -- -1.58 -- -- -0.125 -- 0.01011 648 -- --
206.89 0.671 11.4 -- -- -- -- -- -0.102 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.54 temperature 15.0 10 > th dose dependent rect. 9 6
2 83.56 temperature 15.0 90 > th dose dependent rect. 8 6
10 84.47 temperature 15.0 270 > th dose dependent rect. 9 1
19 85.10 temperature 15.0 270 > th dose dependent rect. 8 3
24 85.39 humidity 90.0 10 < th dose independent rect. 9 6
26 85.49 humidity 90.0 90 < th dose independent rect. 8 7
38 85.86 radiation 40.0 90 < th dose independent rect. 4 15
46 86.16 humidity 90.0 270 < th dose independent rect. 9 1
52 86.29 humidity 90.0 270 < th dose independent rect. 8 3
58 86.41 radiation 40.0 10 < th dose independent rect. 4 16
67 86.50 humidity 90.0 270 < th dose dependent rect. 9 1
70 86.56 humidity 90.0 10 < th dose dependent rect. 9 6
74 86.63 humidity 90.0 90 < th dose dependent rect. 8 6
79 86.74 temperature 20.0 10 > th dose independent rect. 9 6
85 86.84 temperature 15.0 90 > th dose independent rect. 8 7
101 87.04 wind 1.0 10 > th dose independent rect. 9 6
102 87.04 wind 1.0 43200 < th dose dependent rect. 6 21
106 87.12 atmosphere 1000.0 270 > th dose independent rect. 18 9
108 87.14 temperature 10.0 43200 > th dose independent rect. 10 6
109 87.14 atmosphere 1000.0 30 > th dose independent rect. 20 8
117 87.24 temperature 10.0 10 > th dose dependent rect. 9 19
135 87.55 wind 9.0 10 < th dose independent rect. 9 6
136 87.55 temperature 10.0 10 > th dose independent rect. 9 6
138 87.55 atmosphere 995.0 10 > th dose independent rect. 9 6
139 87.55 atmosphere 1015.0 10 < th dose independent rect. 9 6
140 87.55 precipitation 0.1 10 < th dose independent rect. 9 6
141 87.55 temperature 10.0 10 > th dose independent rect. 15 18
142 87.55 precipitation 0.1 10 < th dose dependent rect. 9 6
144 87.58 wind 5.0 270 < th dose independent rect. 4 1
145 87.58 wind 5.0 90 < th dose independent rect. 3 5
146 87.58 radiation 1.0 10 > th dose independent rect. 9 6
152 87.66 precipitation 0.1 90 < th dose independent rect. 8 7
153 87.66 precipitation 0.1 90 < th dose dependent rect. 8 7
155 87.67 atmosphere 1015.0 10 < th dose independent rect. 15 18
168 87.74 wind 9.0 10 < th dose independent rect. 15 18
169 87.74 wind 1.0 43200 > th dose independent rect. 5 21
176 87.82 wind 5.0 270 < th dose independent rect. 3 3
177 87.82 temperature 10.0 1440 > th dose independent rect. 10 6
181 87.82 temperature 10.0 1440 > th dose independent rect. 16 18
186 87.83 wind 9.0 90 < th dose independent rect. 8 7
191 87.86 radiation 1.0 270 > th dose dependent rect. 9 1
202 87.93 radiation 1.0 270 < th dose independent rect. 3 8
208 87.97 precipitation 0.1 90 < th dose independent rect. 8 19
209 87.97 precipitation 0.1 90 < th dose dependent rect. 8 19
215 88.00 radiation 40.0 90 < th dose independent rect. 14 18
218 88.02 temperature 15.0 90 > th dose independent rect. 8 19
220 88.05 radiation 30.0 90 < th dose independent rect. 3 6
222 88.05 radiation 1.0 270 > th dose dependent rect. 8 3
227 88.09 temperature 15.0 270 > th dose independent rect. 9 1
231 88.11 humidity 90.0 270 < th dose dependent rect. 8 3
233 88.12 wind 5.0 10 < th dose independent rect. 4 5
240 88.13 radiation 40.0 90 < th dose dependent rect. 4 15
244 88.15 wind 9.0 10 < th dose independent rect. 9 19
245 88.16 radiation 1.0 270 > th dose independent rect. 9 1
254 88.18 radiation 1.0 270 < th dose dependent rect. 3 8
258 88.21 wind 1.0 43200 < th dose independent rect. 6 22
263 88.23 atmosphere 995.0 10 > th dose independent rect. 9 19
270 88.26 radiation 1.0 270 < th dose dependent rect. 4 1
271 88.27 precipitation 0.1 10 < th dose independent rect. 15 18
272 88.27 precipitation 0.1 10 < th dose dependent rect. 15 18
274 88.28 temperature 10.0 10 > th dose independent rect. 4 5
276 88.28 temperature 30.0 10 < th dose independent rect. 4 5
277 88.28 humidity 50.0 10 > th dose independent rect. 4 5
279 88.28 atmosphere 995.0 10 > th dose independent rect. 4 5
280 88.28 atmosphere 1015.0 10 < th dose independent rect. 4 5
281 88.28 precipitation 0.1 10 < th dose independent rect. 4 5
282 88.28 radiation 40.0 10 < th dose independent rect. 15 18
283 88.28 temperature 10.0 10 > th dose independent rect. 9 19
284 88.28 precipitation 0.1 10 < th dose dependent rect. 4 5
314 88.39 wind 1.0 43200 > th dose independent rect. 23 3
340 88.48 precipitation 0.1 270 < th dose independent rect. 4 1
341 88.48 precipitation 0.1 270 < th dose dependent rect. 4 1
347 88.50 temperature 10.0 270 > th dose independent rect. 4 1
349 88.50 temperature 30.0 270 < th dose independent rect. 4 1
350 88.50 humidity 50.0 270 > th dose independent rect. 4 1
353 88.50 atmosphere 995.0 270 > th dose independent rect. 4 1
354 88.50 atmosphere 1010.0 270 < th dose independent rect. 4 1
356 88.50 radiation 20.0 270 < th dose independent rect. 4 1
360 88.50 temperature 10.0 270 > th dose independent rect. 5 23
364 88.52 radiation 40.0 270 < th dose dependent rect. 4 1
381 88.55 radiation 30.0 270 < th dose dependent rect. 2 7
393 88.58 wind 9.0 270 < th dose dependent rect. 4 1
414 88.64 radiation 1.0 270 < th dose independent rect. 4 1
428 88.67 atmosphere 995.0 10 > th dose independent rect. 15 18
430 88.67 precipitation 0.1 270 < th dose independent rect. 6 21
432 88.67 precipitation 0.1 270 < th dose dependent rect. 6 21
436 88.69 radiation 40.0 270 > th dose independent rect. 9 1
440 88.70 temperature 10.0 270 > th dose independent rect. 17 10
441 88.70 radiation 20.0 270 < th dose independent rect. 17 10
444 88.70 temperature 10.0 270 > th dose independent rect. 3 14
445 88.70 atmosphere 1015.0 270 < th dose independent rect. 3 14
446 88.71 wind 9.0 270 < th dose dependent rect. 8 3
454 88.72 wind 1.0 43200 > th dose independent rect. 6 7
461 88.73 humidity 70.0 90 > th dose independent rect. 3 16
464 88.75 wind 9.0 270 < th dose dependent rect. 7 6
467 88.76 radiation 40.0 270 < th dose independent rect. 11 20
469 88.77 radiation 40.0 270 < th dose dependent rect. 17 10
470 88.78 atmosphere 1000.0 90 > th dose dependent rect. 3 5
474 88.79 radiation 30.0 90 < th dose independent rect. 3 8
488 88.81 wind 9.0 270 < th dose independent rect. 17 10
498 88.81 wind 9.0 270 < th dose dependent rect. 9 1
501 88.82 wind 1.0 270 > th dose independent rect. 3 2
506 88.82 precipitation 0.1 270 < th dose independent rect. 5 23
509 88.82 precipitation 0.1 270 < th dose dependent rect. 5 23
510 88.83 atmosphere 1010.0 270 < th dose independent rect. 3 3
512 88.83 humidity 50.0 10 > th dose independent rect. 15 18
515 88.84 precipitation 0.1 270 < th dose independent rect. 17 10
517 88.84 precipitation 0.1 270 < th dose dependent rect. 17 10
518 88.85 wind 1.0 43200 < th dose independent rect. 10 19
531 88.87 wind 1.0 43200 < th dose dependent rect. 7 5
536 88.88 temperature 10.0 270 > th dose independent rect. 3 3
538 88.88 temperature 30.0 270 < th dose independent rect. 3 3
539 88.88 humidity 50.0 270 > th dose independent rect. 3 3
542 88.88 atmosphere 995.0 270 > th dose independent rect. 3 3
544 88.88 radiation 20.0 270 < th dose independent rect. 3 3
547 88.88 temperature 10.0 1440 > th dose independent rect. 5 5
550 88.88 atmosphere 995.0 1440 > th dose independent rect. 5 5
551 88.88 atmosphere 1015.0 1440 < th dose independent rect. 5 5
553 88.88 temperature 10.0 1440 > th dose independent rect. 10 19
556 88.88 temperature 10.0 270 > th dose independent rect. 6 21
557 88.88 radiation 1.0 90 > th dose dependent rect. 8 6
561 88.89 humidity 60.0 90 > th dose dependent rect. 4 15
566 88.90 wind 9.0 270 < th dose dependent rect. 3 3
568 88.91 precipitation 0.1 270 < th dose independent rect. 3 3
570 88.91 precipitation 0.1 270 < th dose dependent rect. 3 3
571 88.92 wind 7.0 270 < th dose independent rect. 9 1
576 88.92 radiation 40.0 270 < th dose dependent rect. 3 3
578 88.93 radiation 1.0 270 > th dose independent rect. 6 8
586 88.94 wind 9.0 270 < th dose independent rect. 6 21
588 88.94 radiation 10.0 270 < th dose dependent rect. 3 4
598 88.98 humidity 50.0 90 > th dose independent rect. 15 17
612 89.01 temperature 10.0 90 > th dose dependent rect. 3 5
616 89.02 temperature 10.0 10 > th dose dependent rect. 4 5
632 89.05 wind 1.0 43200 < th dose independent rect. 15 11
637 89.06 wind 1.0 43200 < th dose independent sin 16 NA
652 89.09 humidity 70.0 90 > th dose independent rect. 3 8
661 89.11 precipitation 0.1 270 < th dose independent rect. 9 1
666 89.11 precipitation 0.1 270 < th dose dependent rect. 9 1
675 89.13 wind 9.0 270 < th dose independent rect. 3 14
706 89.16 atmosphere 1000.0 270 > th dose dependent rect. 4 1
709 89.17 radiation 30.0 270 > th dose dependent rect. 9 1
711 89.18 wind 1.0 43200 > th dose independent sin 15 NA
712 89.18 wind 5.0 270 < th dose independent rect. 8 3
736 89.20 wind 1.0 43200 > th dose independent rect. 11 17
748 89.23 atmosphere 995.0 270 > th dose independent rect. 9 1
749 89.23 atmosphere 1015.0 270 < th dose independent rect. 9 1
753 89.23 temperature 10.0 270 > th dose independent rect. 10 23
759 89.24 radiation 40.0 10 < th dose independent rect. 12 21
766 89.25 humidity 50.0 270 > th dose independent rect. 17 10
770 89.25 wind 9.0 90 < th dose dependent rect. 3 5
779 89.26 humidity 80.0 90 < th dose independent rect. 22 16
780 89.26 wind 1.0 43200 > th dose independent rect. 10 19
783 89.26 humidity 50.0 270 > th dose dependent rect. 4 1
791 89.28 humidity 50.0 270 > th dose independent rect. 9 1
801 89.29 wind 9.0 270 < th dose independent rect. 5 23
802 89.30 atmosphere 995.0 10 > th dose dependent rect. 4 5
815 89.32 wind 9.0 10 < th dose dependent rect. 4 5
849 89.34 radiation 1.0 270 < th dose dependent rect. 3 15
884 89.38 temperature 15.0 270 > th dose independent rect. 8 3
885 89.38 wind 1.0 14400 < th dose independent rect. 22 4
889 89.38 wind 1.0 43200 < th dose independent rect. 7 6
892 89.38 radiation 40.0 270 < th dose dependent sin 8 NA
905 89.40 humidity 50.0 30 > th dose independent rect. 9 6
924 89.43 wind 1.0 43200 > th dose independent rect. 15 11
942 89.46 temperature 10.0 10 > th dose dependent rect. 15 18
969 89.50 radiation 1.0 270 > th dose independent rect. 8 3
980 89.51 temperature 10.0 270 > th dose dependent rect. 3 3
984 89.52 precipitation 0.1 90 < th dose independent rect. 19 9
992 89.52 precipitation 0.1 90 < th dose dependent rect. 19 9