Os01g0762900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0762900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.79 | 0.422 | 9.78 | -0.758 | 0.817 | -0.815 | -0.204 | 1.29 | -0.521 | 9.67 | 82.93 | 233 | -- | -- |
| 84.98 | 0.429 | 9.8 | -0.726 | 0.713 | -0.718 | -0.342 | -- | -0.505 | 9.84 | 83.23 | 131 | -- | -- |
| 80.78 | 0.419 | 9.79 | -0.761 | 0.805 | -0.813 | -- | 1.36 | -0.541 | 9.62 | 83.75 | 201 | -- | -- |
| 85.38 | 0.43 | 9.8 | -0.727 | 0.709 | -0.756 | -- | -- | -0.521 | 9.54 | 82.76 | 132 | -- | -- |
| 101.22 | 0.471 | 9.81 | -0.812 | -- | -0.842 | -- | 0.844 | -0.508 | -- | 75 | 42 | -- | -- |
| 100.83 | 0.471 | 9.78 | -0.793 | 0.838 | -- | -0.31 | -- | -0.401 | 12 | -- | -- | -- | -- |
| 101.24 | 0.471 | 9.78 | -0.805 | 0.839 | -- | -- | -- | -0.403 | 12 | -- | -- | -- | -- |
| 103.97 | 0.475 | 9.81 | -0.776 | -- | -0.815 | -- | -- | -0.5 | -- | 74.85 | 20 | -- | -- |
| 98.93 | 0.463 | 9.79 | -- | 0.756 | -0.837 | -- | -- | -0.46 | 9.52 | 84.1 | 163 | -- | -- |
| 145.55 | 0.564 | 9.8 | -0.831 | -- | -- | -- | -- | -0.415 | -- | -- | -- | -- | -- |
| 118.32 | 0.509 | 9.76 | -- | 0.85 | -- | -- | -- | -0.313 | 12.1 | -- | -- | -- | -- |
| 119.75 | 0.51 | 9.8 | -- | -- | -0.84 | -- | -- | -0.422 | -- | 75.88 | 14 | -- | -- |
| 163.78 | 0.597 | 9.78 | -- | -- | -- | -- | -- | -0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.43 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 5 | 80.91 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 11 | 81.17 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 13 | 81.33 | humidity | 90.0 | 270 | < th | dose independent | rect. | 3 | 22 |
| 14 | 81.36 | humidity | 90.0 | 270 | < th | dose independent | rect. | 17 | 22 |
| 26 | 81.56 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 17 | 22 |
| 35 | 81.63 | humidity | 90.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 38 | 81.66 | humidity | 80.0 | 270 | > th | dose dependent | no | NA | NA |
| 46 | 81.72 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 66 | 81.86 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 74 | 81.91 | humidity | 80.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 86 | 81.99 | humidity | 90.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 90 | 82.03 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 19 |
| 150 | 82.52 | humidity | 90.0 | 30 | < th | dose independent | rect. | 8 | 20 |
| 153 | 82.53 | humidity | 80.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 154 | 82.56 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 16 |
| 167 | 82.62 | humidity | 90.0 | 270 | < th | dose independent | no | NA | NA |
| 232 | 82.99 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 238 | 83.08 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 9 |
| 250 | 83.17 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 9 |
| 255 | 83.22 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 267 | 83.29 | humidity | 90.0 | 270 | > th | dose independent | rect. | 21 | 22 |
| 268 | 83.30 | humidity | 90.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 282 | 83.39 | wind | 7.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 290 | 83.42 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 306 | 83.50 | humidity | 90.0 | 90 | < th | dose independent | rect. | 22 | 17 |
| 312 | 83.54 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 313 | 83.54 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 8 |
| 330 | 83.65 | humidity | 90.0 | 270 | > th | dose independent | no | NA | NA |
| 332 | 83.66 | humidity | 90.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 335 | 83.67 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 340 | 83.68 | humidity | 90.0 | 270 | > th | dose independent | rect. | 13 | 23 |
| 357 | 83.75 | humidity | 90.0 | 270 | > th | dose independent | rect. | 9 | 23 |
| 358 | 83.76 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 365 | 83.77 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 415 | 83.91 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 2 | 15 |
| 426 | 83.93 | humidity | 80.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 434 | 83.95 | humidity | 90.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 523 | 84.16 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 544 | 84.20 | temperature | 25.0 | 720 | < th | dose dependent | sin | 0 | NA |
| 567 | 84.23 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 604 | 84.30 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 689 | 84.44 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 705 | 84.47 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 706 | 84.48 | humidity | 90.0 | 270 | < th | dose independent | sin | 7 | NA |
| 714 | 84.49 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 715 | 84.49 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 806 | 84.64 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 812 | 84.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 816 | 84.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 829 | 84.67 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 830 | 84.67 | humidity | 90.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 841 | 84.69 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 16 |
| 846 | 84.70 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 875 | 84.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 12 |
| 902 | 84.78 | humidity | 90.0 | 270 | > th | dose independent | sin | 7 | NA |
| 907 | 84.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 910 | 84.79 | humidity | 90.0 | 270 | < th | dose independent | rect. | 10 | 23 |
| 914 | 84.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 920 | 84.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 932 | 84.82 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 957 | 84.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 969 | 84.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 984 | 84.91 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 23 |