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Os01g0762400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : NLI interacting factor domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.35 (0.0281) R2 : 0.572
β1 : 0.857 (0.103) R2dD : 0.0674 R2D : 0.0567
β2 : 1.72 (0.0734) R2dC : 0.517 R2C : 0.507
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0665 (0.0601) R2dN8 : 0.00154 R2N8 : -0.00526
σ : 0.529
deviance : 127.53
__
_____
C
peak time of C : 17.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
99.37 0.468 8.2 2.11 1.8 -1.03 0.0884 3.29 0.522 17.6 21.18 1787 -- --
109.78 0.488 8.3 1.35 1.67 -0.818 0.23 -- 0.32 17.6 17.93 7029 -- --
99.37 0.464 8.2 2.11 1.8 -1.03 -- 3.29 0.522 17.7 21.17 1825 -- --
109.67 0.488 8.29 1.35 1.69 -0.917 -- -- 0.331 17.6 15.99 7058 -- --
247.83 0.733 8.18 1.89 -- -1.11 -- 2.34 0.478 -- 20.61 2733 -- --
127.42 0.529 8.35 0.858 1.72 -- 0.208 -- 0.0656 17.5 -- -- -- --
127.53 0.529 8.35 0.857 1.72 -- -- -- 0.0665 17.5 -- -- -- --
256.14 0.745 8.28 1.2 -- -0.825 -- -- 0.19 -- 22.14 5618 -- --
137.83 0.547 8.37 -- 1.6 -0.504 -- -- 0.0224 17.6 21.4 1283 -- --
281.04 0.783 8.33 0.801 -- -- -- -- 0.0248 -- -- -- -- --
146.89 0.567 8.37 -- 1.7 -- -- -- -0.029 17.6 -- -- -- --
273.26 0.772 8.37 -- -- 0.979 -- -- -0.155 -- 24.1 1278 -- --
297.96 0.806 8.35 -- -- -- -- -- -0.0641 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.92 temperature 10.0 270 > th dose dependent rect. 12 19
2 92.95 wind 9.0 270 < th dose independent rect. 5 22
3 93.11 temperature 10.0 270 > th dose dependent rect. 11 21
4 93.37 radiation 10.0 270 < th dose independent rect. 1 7
6 93.60 radiation 20.0 270 < th dose dependent rect. 1 7
7 93.67 radiation 20.0 90 < th dose independent rect. 3 6
10 93.80 wind 9.0 270 < th dose independent rect. 7 18
12 93.95 precipitation 0.1 270 < th dose independent rect. 3 2
13 93.95 precipitation 0.1 270 < th dose dependent rect. 3 2
15 94.00 radiation 40.0 10 < th dose independent rect. 4 18
16 94.04 temperature 10.0 270 > th dose dependent rect. 1 6
17 94.07 wind 9.0 90 < th dose dependent rect. 3 5
18 94.14 wind 5.0 90 < th dose independent rect. 3 5
29 94.45 precipitation 0.1 270 < th dose independent rect. 1 6
30 94.45 precipitation 0.1 270 < th dose dependent rect. 1 6
31 94.46 precipitation 0.1 90 < th dose independent rect. 3 5
32 94.46 humidity 90.0 14400 > th dose dependent rect. 23 3
33 94.46 precipitation 0.1 90 < th dose dependent rect. 3 5
34 94.55 wind 5.0 270 < th dose independent rect. 1 6
35 94.56 wind 5.0 270 < th dose independent rect. 3 2
40 94.65 wind 9.0 270 < th dose independent rect. 6 20
46 94.72 temperature 10.0 270 > th dose dependent rect. 2 4
48 94.77 humidity 50.0 270 > th dose dependent rect. 3 2
50 94.82 humidity 90.0 14400 > th dose dependent rect. 24 1
58 94.92 humidity 70.0 270 > th dose independent rect. 1 6
59 94.92 temperature 10.0 270 > th dose dependent rect. 3 2
61 94.93 radiation 40.0 10 < th dose dependent rect. 4 18
62 94.95 humidity 70.0 90 > th dose independent rect. 3 5
63 94.96 humidity 90.0 14400 > th dose dependent rect. 22 5
64 94.97 radiation 1.0 270 < th dose independent rect. 3 2
67 94.98 temperature 10.0 270 > th dose independent rect. 3 2
69 94.98 temperature 30.0 270 < th dose independent rect. 3 2
70 94.98 humidity 50.0 270 > th dose independent rect. 3 2
73 94.98 atmosphere 995.0 270 > th dose independent rect. 3 2
74 94.98 atmosphere 1010.0 270 < th dose independent rect. 3 2
79 94.98 temperature 10.0 270 > th dose independent rect. 5 22
80 94.98 radiation 30.0 270 < th dose dependent rect. 3 2
86 95.01 radiation 20.0 270 < th dose dependent rect. 1 12
88 95.03 radiation 20.0 90 < th dose independent rect. 3 19
92 95.10 radiation 40.0 90 < th dose dependent rect. 3 6
99 95.17 temperature 10.0 90 > th dose independent rect. 3 5
101 95.17 temperature 30.0 90 < th dose independent rect. 3 5
102 95.17 humidity 50.0 90 > th dose independent rect. 3 5
104 95.17 atmosphere 995.0 90 > th dose independent rect. 3 5
105 95.17 atmosphere 1015.0 90 < th dose independent rect. 3 5
106 95.17 temperature 10.0 90 > th dose independent rect. 8 19
110 95.18 temperature 10.0 270 > th dose independent rect. 1 6
112 95.18 temperature 30.0 270 < th dose independent rect. 1 6
113 95.18 humidity 50.0 270 > th dose independent rect. 1 6
115 95.18 atmosphere 995.0 270 > th dose independent rect. 1 6
116 95.18 atmosphere 1015.0 270 < th dose independent rect. 1 6
119 95.18 humidity 50.0 270 > th dose dependent rect. 1 6
120 95.18 humidity 50.0 90 > th dose dependent rect. 3 6
123 95.26 wind 7.0 10 < th dose dependent rect. 4 5
125 95.28 radiation 20.0 90 < th dose independent rect. 3 8
156 95.61 wind 9.0 270 < th dose dependent rect. 3 2
160 95.64 wind 9.0 270 < th dose dependent rect. 1 6
169 95.69 temperature 30.0 270 < th dose dependent rect. 7 19
184 95.84 temperature 15.0 10 > th dose dependent rect. 14 19
189 95.93 temperature 15.0 30 > th dose dependent rect. 12 21
192 95.96 radiation 40.0 90 < th dose independent rect. 3 16
198 96.02 wind 9.0 10 < th dose independent rect. 9 19
220 96.09 temperature 10.0 270 > th dose independent rect. 6 20
223 96.12 radiation 10.0 270 < th dose independent rect. 1 14
226 96.15 atmosphere 1010.0 270 < th dose independent rect. 11 10
227 96.15 radiation 40.0 90 < th dose dependent rect. 3 8
242 96.28 radiation 20.0 90 < th dose independent rect. 3 15
249 96.33 temperature 10.0 270 > th dose dependent rect. 12 9
264 96.50 atmosphere 995.0 90 > th dose independent rect. 8 19
267 96.53 precipitation 0.1 270 < th dose independent rect. 7 18
268 96.53 precipitation 0.1 270 < th dose dependent rect. 7 18
270 96.54 radiation 30.0 10 < th dose independent rect. 4 5
309 96.77 precipitation 0.1 10 < th dose independent rect. 4 5
313 96.77 precipitation 0.1 10 < th dose dependent rect. 4 5
316 96.78 wind 9.0 270 < th dose dependent rect. 7 18
317 96.78 atmosphere 995.0 90 > th dose dependent rect. 8 19
320 96.81 wind 7.0 10 < th dose independent rect. 4 5
337 96.91 temperature 10.0 10 > th dose independent rect. 4 5
339 96.91 temperature 30.0 10 < th dose independent rect. 4 5
340 96.91 humidity 50.0 10 > th dose independent rect. 4 5
342 96.91 atmosphere 995.0 10 > th dose independent rect. 4 5
343 96.91 atmosphere 1015.0 10 < th dose independent rect. 4 5
344 96.91 temperature 10.0 10 > th dose independent rect. 9 19
346 96.92 radiation 10.0 270 < th dose independent rect. 1 17
353 96.94 temperature 10.0 270 > th dose dependent rect. 1 20
394 97.08 humidity 80.0 43200 > th dose dependent rect. 3 11
395 97.08 radiation 40.0 270 < th dose dependent rect. 1 16
399 97.11 atmosphere 995.0 10 > th dose dependent rect. 9 19
404 97.14 temperature 25.0 1440 > th dose dependent rect. 16 1
431 97.19 humidity 80.0 43200 > th dose dependent rect. 4 7
436 97.21 radiation 30.0 14400 > th dose independent rect. 16 16
437 97.21 radiation 40.0 10 < th dose dependent rect. 4 5
467 97.37 radiation 40.0 90 < th dose dependent rect. 3 15
468 97.38 radiation 40.0 14400 < th dose independent rect. 5 3
478 97.41 temperature 20.0 1440 > th dose dependent rect. 20 1
513 97.57 temperature 20.0 720 > th dose dependent rect. 19 20
519 97.62 precipitation 0.1 270 < th dose independent rect. 6 20
520 97.62 precipitation 0.1 270 < th dose dependent rect. 6 20
527 97.67 humidity 50.0 270 > th dose independent rect. 7 18
535 97.73 temperature 15.0 270 > th dose independent rect. 13 17
545 97.79 radiation 40.0 270 < th dose independent rect. 11 20
560 97.81 temperature 15.0 720 > th dose dependent rect. 17 15
562 97.82 radiation 40.0 10 < th dose independent rect. 4 16
563 97.83 precipitation 0.1 270 < th dose independent rect. 13 17
567 97.83 precipitation 0.1 270 < th dose dependent rect. 13 17
568 97.84 atmosphere 995.0 10 > th dose independent rect. 9 19
569 97.84 atmosphere 995.0 270 > th dose independent rect. 6 20
572 97.85 temperature 30.0 30 < th dose dependent rect. 9 19
578 97.88 temperature 10.0 10 > th dose dependent rect. 4 5
609 97.98 radiation 40.0 14400 < th dose independent rect. 17 15
642 98.05 radiation 20.0 90 < th dose independent rect. 3 12
650 98.09 radiation 20.0 90 < th dose independent rect. 3 10
655 98.10 atmosphere 1015.0 270 < th dose dependent rect. 3 2
659 98.12 radiation 40.0 90 < th dose dependent rect. 3 10
663 98.13 precipitation 0.1 270 < th dose independent rect. 5 22
665 98.13 precipitation 0.1 270 < th dose dependent rect. 5 22
670 98.15 radiation 40.0 90 < th dose dependent rect. 3 12
677 98.18 humidity 90.0 43200 < th dose independent rect. 4 6
686 98.19 temperature 25.0 1440 > th dose dependent rect. 12 7
701 98.23 temperature 15.0 270 > th dose independent rect. 11 10
731 98.28 temperature 20.0 1440 > th dose dependent rect. 18 4
740 98.31 radiation 30.0 270 < th dose dependent sin 7 NA
746 98.33 wind 9.0 270 < th dose independent rect. 6 7
764 98.38 precipitation 0.1 10 < th dose independent rect. 9 19
767 98.38 precipitation 0.1 10 < th dose dependent rect. 9 19
770 98.39 humidity 80.0 43200 > th dose dependent sin 3 NA
783 98.42 humidity 90.0 43200 < th dose independent rect. 3 12
784 98.42 radiation 40.0 270 < th dose independent rect. 1 16
804 98.48 humidity 90.0 14400 < th dose independent rect. 24 1
841 98.56 radiation 10.0 270 < th dose dependent sin 5 NA
843 98.57 radiation 30.0 14400 > th dose independent rect. 7 1
868 98.60 humidity 50.0 270 > th dose independent rect. 6 20
925 98.72 precipitation 0.1 270 < th dose independent rect. 11 10
928 98.72 precipitation 0.1 270 < th dose dependent rect. 11 10
931 98.73 precipitation 0.1 270 < th dose independent rect. 6 7
932 98.73 radiation 40.0 14400 < th dose independent rect. 20 12
936 98.73 precipitation 0.1 270 < th dose dependent rect. 6 7
943 98.77 temperature 10.0 270 > th dose independent rect. 6 7
944 98.77 atmosphere 995.0 270 > th dose independent rect. 6 7
945 98.77 atmosphere 1015.0 270 < th dose independent rect. 6 7
962 98.79 radiation 1.0 270 > th dose dependent rect. 6 6
966 98.80 temperature 30.0 720 < th dose dependent rect. 15 19
976 98.83 precipitation 0.1 270 < th dose independent rect. 2 16
978 98.83 precipitation 0.1 270 < th dose dependent rect. 2 16
984 98.85 radiation 40.0 14400 < th dose independent rect. 22 10