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Os01g0762300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.5 (0.0178) R2 : 0.848
β1 : -1.04 (0.0652) R2dD : 0.0881 R2D : 0.0886
β2 : 1.34 (0.0462) R2dC : 0.282 R2C : 0.248
β3 : 1.51 (0.0392) R2dE : 0.497 R2E : 0.489
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.173 (0.038) R2dN8 : 0.00917 R2N8 : -0.00671
σ : 0.333
deviance : 51.06
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_____
C
peak time of C : 5.07
E
wheather : radiation
threshold : 9.481e-06
memory length : 33
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 9.2
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.53 0.31 14.5 -1.02 1.35 1.52 0.242 -1.31 -0.166 5.13 0.1763 34 9.15 --
50.98 0.333 14.5 -1.04 1.33 1.52 0.198 -- -0.174 5.12 2.155e-05 33 9.15 --
43.62 0.308 14.5 -1.01 1.36 1.52 -- -1.32 -0.163 5.14 7.669e-06 33 9.19 --
51.06 0.333 14.5 -1.04 1.34 1.51 -- -- -0.173 5.07 9.481e-06 33 9.2 --
90.89 0.444 14.6 -1.16 -- 1.45 -- -0.893 -0.0919 -- 2.528 63 5.73 --
79.84 0.419 14.6 -1.2 1.9 -- -0.929 -- -0.184 1.65 -- -- -- --
83.22 0.427 14.6 -1.17 1.9 -- -- -- -0.179 1.71 -- -- -- --
76.98 0.409 14.5 -1.15 -- 1.89 -- -- -0.126 -- 32.86 344 7.94 --
80.26 0.417 14.5 -- 1.4 1.56 -- -- -0.148 5.29 0.001225 33 9.36 --
304.07 0.815 14.6 -1.09 -- -- -- -- -0.137 -- -- -- -- --
119.03 0.51 14.5 -- 1.88 -- -- -- -0.0497 1.69 -- -- -- --
110.62 0.49 14.5 -- -- 1.87 -- -- 0.000227 -- 28.46 364 8.34 --
335.31 0.855 14.5 -- -- -- -- -- -0.0161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.33 radiation 1.0 30 < th dose dependent sin 15 NA
3 45.74 radiation 1.0 270 > th dose independent rect. 11 6
6 46.66 radiation 1.0 30 < th dose independent sin 15 NA
8 47.19 temperature 10.0 270 > th dose dependent rect. 11 5
10 47.48 wind 7.0 270 < th dose independent rect. 11 6
11 47.52 humidity 50.0 270 > th dose independent rect. 16 19
12 47.57 precipitation 0.1 270 < th dose independent rect. 11 6
13 47.57 precipitation 0.1 270 < th dose dependent rect. 11 6
19 47.90 atmosphere 1015.0 270 < th dose independent rect. 17 18
20 47.92 radiation 40.0 90 < th dose dependent sin 14 NA
23 47.96 temperature 15.0 270 > th dose independent rect. 11 6
25 48.03 radiation 1.0 270 > th dose independent rect. 12 4
28 48.09 atmosphere 1015.0 270 < th dose independent rect. 11 6
29 48.09 temperature 10.0 270 > th dose independent rect. 17 18
31 48.18 radiation 1.0 270 > th dose independent rect. 13 2
32 48.21 wind 9.0 270 < th dose independent rect. 17 18
37 48.41 humidity 90.0 270 < th dose independent rect. 11 6
38 48.41 radiation 1.0 90 > th dose independent rect. 13 6
59 48.82 humidity 50.0 270 > th dose independent rect. 15 21
60 48.83 precipitation 0.1 270 < th dose independent rect. 13 2
61 48.83 precipitation 0.1 270 < th dose dependent rect. 13 2
63 48.85 precipitation 0.1 270 < th dose independent rect. 17 18
64 48.85 precipitation 0.1 270 < th dose dependent rect. 17 18
66 48.89 wind 1.0 270 > th dose independent rect. 11 6
69 49.02 humidity 80.0 270 < th dose independent rect. 12 3
70 49.02 wind 7.0 270 < th dose independent rect. 12 4
76 49.22 atmosphere 995.0 270 > th dose independent rect. 17 18
77 49.26 precipitation 0.1 270 < th dose independent rect. 12 4
78 49.26 precipitation 0.1 270 < th dose dependent rect. 12 4
80 49.28 wind 7.0 270 < th dose independent rect. 13 2
81 49.28 radiation 30.0 270 < th dose independent rect. 15 10
93 49.35 temperature 20.0 270 > th dose independent rect. 13 2
98 49.39 temperature 10.0 270 > th dose independent rect. 13 2
100 49.39 atmosphere 1010.0 270 < th dose independent rect. 13 2
102 49.39 temperature 10.0 270 > th dose independent rect. 15 22
109 49.57 temperature 20.0 270 > th dose independent rect. 12 4
110 49.58 atmosphere 1010.0 270 < th dose independent rect. 12 4
125 49.65 temperature 10.0 270 > th dose independent rect. 12 4
128 49.65 temperature 10.0 270 > th dose independent rect. 16 20
130 49.66 atmosphere 1015.0 270 < th dose independent rect. 16 20
132 49.71 radiation 1.0 270 > th dose independent rect. 10 20
147 49.91 wind 9.0 270 < th dose independent rect. 16 20
160 50.11 wind 9.0 270 < th dose independent rect. 15 22
164 50.17 wind 1.0 270 > th dose independent rect. 12 4
171 50.22 temperature 10.0 1440 > th dose independent rect. 13 6
175 50.22 temperature 10.0 1440 > th dose independent rect. 19 18
178 50.22 atmosphere 995.0 1440 > th dose independent rect. 19 18
193 50.40 radiation 40.0 270 < th dose independent rect. 17 18
204 50.52 wind 1.0 270 > th dose independent rect. 13 2
207 50.57 humidity 90.0 270 < th dose dependent rect. 12 3
211 50.69 precipitation 0.1 270 < th dose independent rect. 16 20
212 50.69 precipitation 0.1 270 < th dose dependent rect. 16 20
229 50.77 temperature 30.0 270 < th dose independent rect. 17 18
230 50.80 precipitation 0.1 270 < th dose independent rect. 1 14
231 50.80 precipitation 0.1 270 < th dose dependent rect. 1 14
232 50.82 atmosphere 995.0 270 > th dose independent rect. 11 6
254 51.06 atmosphere 995.0 270 > th dose independent rect. 13 2
257 51.08 radiation 1.0 270 > th dose dependent rect. 12 4
267 51.14 radiation 1.0 90 > th dose independent sin 16 NA
279 51.18 humidity 90.0 270 < th dose dependent rect. 11 5
285 51.25 wind 9.0 270 < th dose independent rect. 1 14
291 51.34 temperature 10.0 270 > th dose independent rect. 15 10
292 51.34 temperature 10.0 270 > th dose independent rect. 1 14
293 51.34 atmosphere 1015.0 270 < th dose independent rect. 1 14
302 51.43 atmosphere 995.0 270 > th dose independent rect. 16 20
306 51.50 humidity 50.0 270 > th dose independent rect. 15 10
339 51.77 wind 9.0 270 < th dose independent rect. 15 10
348 51.83 wind 9.0 270 < th dose independent rect. 12 17
352 51.85 temperature 10.0 270 > th dose independent rect. 5 7
353 51.85 atmosphere 995.0 270 > th dose independent rect. 5 7
354 51.85 atmosphere 1015.0 270 < th dose independent rect. 5 7
355 51.85 temperature 10.0 270 > th dose independent rect. 12 17
363 51.90 precipitation 0.1 270 < th dose independent rect. 5 7
365 51.90 precipitation 0.1 270 < th dose dependent rect. 5 7
367 51.91 radiation 1.0 270 > th dose dependent rect. 12 18
385 51.98 wind 9.0 270 < th dose independent rect. 5 7
388 52.01 precipitation 0.1 270 < th dose independent rect. 12 17
391 52.01 precipitation 0.1 270 < th dose dependent rect. 12 17
395 52.05 wind 9.0 270 < th dose independent rect. 11 19
397 52.06 radiation 40.0 270 < th dose dependent rect. 15 10
411 52.15 temperature 10.0 270 > th dose independent rect. 6 5
412 52.15 atmosphere 995.0 270 > th dose independent rect. 6 5
413 52.15 atmosphere 1015.0 270 < th dose independent rect. 6 5
415 52.15 temperature 10.0 270 > th dose independent rect. 11 19
416 52.17 precipitation 0.1 270 < th dose independent rect. 6 5
417 52.17 precipitation 0.1 270 < th dose dependent rect. 6 5
423 52.21 wind 9.0 270 < th dose independent rect. 6 5
426 52.25 precipitation 0.1 270 < th dose independent rect. 11 19
427 52.25 precipitation 0.1 270 < th dose dependent rect. 11 19
434 52.31 atmosphere 1015.0 270 < th dose dependent rect. 13 2
449 52.38 humidity 50.0 270 > th dose independent rect. 6 5
478 52.55 humidity 50.0 270 > th dose independent rect. 13 2
495 52.68 temperature 10.0 90 > th dose dependent rect. 18 19
500 52.69 precipitation 0.1 270 < th dose independent rect. 15 10
502 52.69 precipitation 0.1 270 < th dose dependent rect. 15 10
513 52.73 atmosphere 995.0 270 > th dose independent rect. 1 14
524 52.77 wind 9.0 270 < th dose dependent rect. 13 2
555 52.79 temperature 10.0 270 > th dose dependent rect. 18 17
564 52.86 wind 1.0 90 > th dose dependent rect. 12 6
588 52.98 humidity 50.0 270 > th dose independent rect. 5 7
629 53.10 radiation 1.0 90 > th dose dependent sin 14 NA
650 53.14 atmosphere 1015.0 270 < th dose independent rect. 16 9
663 53.22 radiation 1.0 270 > th dose independent rect. 6 5
664 53.23 atmosphere 1015.0 1440 < th dose independent rect. 15 4
665 53.24 wind 1.0 90 > th dose independent rect. 7 6
669 53.29 wind 9.0 270 < th dose dependent rect. 12 4
670 53.29 wind 9.0 270 < th dose dependent rect. 11 6
677 53.34 atmosphere 1015.0 90 < th dose dependent rect. 13 5
696 53.41 wind 9.0 270 < th dose independent rect. 10 21
719 53.48 radiation 40.0 270 < th dose independent rect. 7 3
738 53.49 radiation 40.0 270 < th dose independent rect. 6 5
740 53.52 temperature 30.0 270 < th dose independent rect. 6 5
753 53.58 temperature 30.0 270 < th dose independent rect. 6 14
755 53.59 wind 9.0 270 < th dose independent rect. 7 3
756 53.59 temperature 10.0 270 > th dose independent rect. 7 3
757 53.59 atmosphere 995.0 270 > th dose independent rect. 7 3
758 53.59 atmosphere 1015.0 270 < th dose independent rect. 7 3
760 53.59 temperature 10.0 270 > th dose independent rect. 10 21
763 53.61 precipitation 0.1 270 < th dose independent rect. 7 3
765 53.61 precipitation 0.1 270 < th dose dependent rect. 7 3
767 53.62 humidity 50.0 270 > th dose independent rect. 7 3
779 53.65 radiation 40.0 270 < th dose independent sin 15 NA
841 53.87 wind 1.0 270 > th dose independent rect. 16 9
877 53.96 humidity 50.0 270 > th dose independent rect. 1 14
906 54.05 radiation 1.0 270 > th dose independent rect. 4 7
917 54.05 radiation 1.0 270 > th dose independent rect. 18 18
919 54.05 radiation 10.0 90 < th dose dependent rect. 17 10
925 54.07 radiation 40.0 30 < th dose independent rect. 13 5
938 54.16 temperature 30.0 270 < th dose independent rect. 7 3
940 54.16 wind 1.0 270 > th dose independent rect. 5 7
985 54.36 temperature 30.0 270 < th dose independent rect. 5 7
986 54.37 radiation 1.0 270 > th dose independent rect. 7 3
988 54.37 atmosphere 995.0 270 > th dose independent rect. 16 9