Os01g0761300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Long-chain-fatty-acid-CoA ligase-like protein.
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Os01g0761300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Long-chain-fatty-acid-CoA ligase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.87 | 0.308 | 7.92 | -0.843 | 0.714 | 1.42 | -0.445 | -0.288 | -0.241 | 5.14 | 10.63 | 642 | -- | -- |
| 42.93 | 0.305 | 7.92 | -0.793 | 0.718 | 1.42 | -0.403 | -- | -0.227 | 5.12 | 10.35 | 636 | -- | -- |
| 43.32 | 0.307 | 7.92 | -0.807 | 0.744 | 1.45 | -- | -0.0854 | -0.232 | 5.05 | 9.957 | 601 | -- | -- |
| 43.33 | 0.307 | 7.92 | -0.792 | 0.745 | 1.44 | -- | -- | -0.228 | 5.04 | 10.1 | 600 | -- | -- |
| 52.91 | 0.339 | 7.94 | -0.914 | -- | 1.32 | -- | -0.445 | -0.255 | -- | 14.25 | 1162 | -- | -- |
| 67.62 | 0.386 | 7.88 | -0.455 | 0.503 | -- | -0.415 | -- | -0.0119 | 3.43 | -- | -- | -- | -- |
| 68.14 | 0.387 | 7.88 | -0.448 | 0.499 | -- | -- | -- | -0.00936 | 3.28 | -- | -- | -- | -- |
| 53.08 | 0.339 | 7.93 | -0.822 | -- | 1.32 | -- | -- | -0.229 | -- | 12.87 | 1161 | -- | -- |
| 56.39 | 0.35 | 7.88 | -- | 0.757 | 0.909 | -- | -- | -0.0582 | 4.93 | 23.58 | 589 | -- | -- |
| 82.23 | 0.424 | 7.88 | -0.426 | -- | -- | -- | -- | 0.00378 | -- | -- | -- | -- | -- |
| 73.42 | 0.401 | 7.87 | -- | 0.49 | -- | -- | -- | 0.0405 | 3.28 | -- | -- | -- | -- |
| 67.71 | 0.383 | 7.89 | -- | -- | 0.734 | -- | -- | -0.074 | -- | 21.9 | 1156 | -- | -- |
| 87.02 | 0.435 | 7.87 | -- | -- | -- | -- | -- | 0.0511 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 17 |
| 17 | 41.89 | temperature | 10 | 720 | > th | dose dependent | sin | 23 | NA |
| 30 | 42.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 46 | 42.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 170 | 43.10 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 229 | 43.36 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 269 | 43.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 291 | 43.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 293 | 43.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 10 |
| 320 | 43.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 20 |
| 356 | 44.04 | humidity | 50 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 401 | 44.27 | temperature | 30 | 720 | < th | dose dependent | sin | 23 | NA |
| 413 | 44.33 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 444 | 44.45 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 445 | 44.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 503 | 44.57 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 530 | 44.59 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 599 | 44.66 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 600 | 44.66 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 641 | 44.72 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 765 | 44.85 | radiation | 20 | 4320 | > th | dose dependent | rect. | 15 | 17 |